Gene Gbro_0087 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagGbro_0087 
Symbol 
ID8549414 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameGordonia bronchialis DSM 43247 
KingdomBacteria 
Replicon accessionNC_013441 
Strand
Start bp98832 
End bp100598 
Gene Length1767 bp 
Protein Length588 aa 
Translation table11 
GC content69% 
IMG OID 
Producthelix-turn-helix Fis-type 
Protein accessionYP_003271332 
Protein GI262200124 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones20 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
GTGAGCCAGC AGCGTGACCA GCAGCTTCGC ATCGCGGCGG CCCGGGCCGA CTTTCTCGAG 
TTCGGTCCGC AGGGCGCGGC GGGAGTCGAT GACGTGGTCG CGGCGTCGTG GTCGCGCAGC
CGTTCGGCAG GAGTCGACGC CGACCGCTAC GAGGTCGCGT TCCACTCCGA CGTCGACTTC
GACTCCCGGC TGGCCCGCTG CGCACGCCCG GTCATCGACC GCCTCGCCGA CGACATGTCC
GACATCCCCG TCACCATCGC CTTCACCGAC GCCGCCGCCC GGATCGTCGA CCGCCGGGAC
TGTTCGACGG CGGTCGGTCG CGTCCTCGAC CGCGTCGACT TCGCGCTCGG CTTCTCCTTC
GACGAGGGCT CGATCGGCAC CAACGGCGTC GGCACGGTCT TCGAGGTCGG TGCCCCGGTC
AGCGTCGTCG GCTCCGAACA CTTCAATCAG GCGCTGACCC CGTTCGCCTG TGCCGGCACG
CCCATCTGGG ATCCGTTGAC GCGTCGGATG GCCGGGGTGC TGGACGTCAG CATGCTCTCC
GACAGCTGGA ATCCGCTCAT CGAACCGCTC ATCCGGGCCG CGGCCTCCGA CATCGGACGC
AATCTGCTCC TGGATCGCAG TCCCGCCAAA CGCGCGCTGT TCGAGACCTT CCTACGGGCT
GACACGCGGC CGCGCCAGGC GGTGATGGCC GTCGGCGACA CCGTGATGGC CAACGAGTTC
GCGCGGGATC TGCTGACGCC GGATGAGCAG GCGAGTATCG CGCAGTTCGC CGAGTTCCTG
ATGTCGCGCC ACGACCGGTC CACCCAGTCC CTCACGCTGC CGGGCGGCCG TCGAATCCGG
TTGCGTACCA ACTCGATCAG CTGCAATGGC GACACCGTCG GCATGGTCAT CCTGCTCGAC
GAGGAACAGG CGCCGGACCC GGTGGTGGCC GACGACGGAC CCCGGACGCT GCCCGCCCTG
CCGTCGCCGG ACATCGGCGT GAGCCCGGCC TGGCGATCGG CACGCACCGA GGTACTGACG
GCCTTGACCG CACACGAGGC CGTGCTGGTC CTGGGTGAGT CGGGTACCGG TCGCTGCACG
CTGGTCGGCG ACGTCTTCGG GTCGCTGCAC GAGGATGCAC CCGTGATCGT CGTCGACGCC
ACGGCCGACG ACCCTGAGCC GTTGCCCGAT CTCGGCCCGG GTCCGGCATT GGTGGTGCTG
CGCAATCTCG ACCGGATGCC CGCCGAGTCG CTCGATGCCA TCGACGGCGT GATCCGCGCG
GCGATCCGGG CCGGCCACGA CGTCGCGGCC ACCATGGAGC CGGTTCCGGA CTCGCCGCGG
GACCCGATTC CCCACTCCCG CTTACTCTTT CGCTTTGACC GATCCGTCGC GGTGCCACCG
CTTCGGTTGC GCACGGCAGA TCTGCCCGCG GTGGTCGATC GCGTGGTCAA GACGATCTCG
CCGCAGCGGT CGCACCGCCT CAGTCCCAAG GCGATGCGGA TGATCACCGG GTTCCACTGG
CCGGGCAACA TCGTGCAGCT GCGCGAGGCA CTCGAGTTCG CGTTGCGACG ACGACCGGTG
GGCGAGATCC AGCCCGAGGA TCTGCCGGGC TTCTGCCGCA GCACCGCGCA TCGGGCGTTG
ACGCCGCTGG AGAGTGCCGA ACGCGACGCG ATCATCGCTG CCCTGGAGAG TCACGGGGGC
AACCGGTTAC ACGCTGCCGC CGCGTTGGGG ATGTCGCGCA GCACGCTGTA TCGCAAGCTC
CGGGTCTATG GAATCCTCAG CGTGTGA
 
Protein sequence
MSQQRDQQLR IAAARADFLE FGPQGAAGVD DVVAASWSRS RSAGVDADRY EVAFHSDVDF 
DSRLARCARP VIDRLADDMS DIPVTIAFTD AAARIVDRRD CSTAVGRVLD RVDFALGFSF
DEGSIGTNGV GTVFEVGAPV SVVGSEHFNQ ALTPFACAGT PIWDPLTRRM AGVLDVSMLS
DSWNPLIEPL IRAAASDIGR NLLLDRSPAK RALFETFLRA DTRPRQAVMA VGDTVMANEF
ARDLLTPDEQ ASIAQFAEFL MSRHDRSTQS LTLPGGRRIR LRTNSISCNG DTVGMVILLD
EEQAPDPVVA DDGPRTLPAL PSPDIGVSPA WRSARTEVLT ALTAHEAVLV LGESGTGRCT
LVGDVFGSLH EDAPVIVVDA TADDPEPLPD LGPGPALVVL RNLDRMPAES LDAIDGVIRA
AIRAGHDVAA TMEPVPDSPR DPIPHSRLLF RFDRSVAVPP LRLRTADLPA VVDRVVKTIS
PQRSHRLSPK AMRMITGFHW PGNIVQLREA LEFALRRRPV GEIQPEDLPG FCRSTAHRAL
TPLESAERDA IIAALESHGG NRLHAAAALG MSRSTLYRKL RVYGILSV