Gene Gbro_0034 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagGbro_0034 
Symbol 
ID8549361 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameGordonia bronchialis DSM 43247 
KingdomBacteria 
Replicon accessionNC_013441 
Strand
Start bp39960 
End bp43421 
Gene Length3462 bp 
Protein Length1153 aa 
Translation table11 
GC content62% 
IMG OID 
Producthelicase domain protein 
Protein accessionYP_003271286 
Protein GI262200078 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones16 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGACGCAAC TGCCCGACTT TGCGACCAAT CACGCATCGA CCGAAGCGGG ACTCACGGTT 
GCTGACAAAG TCAATGAACT GTTCTGTCTG CTGCGTGAGA ACAAGGTGAC TGCTCCACCG
ATTGCTATCG CGACGGCCTA CGTCAACCCA GCTGGTTTCG CGCTTCTTGC TGACGAGTTG
GAACTAGCAC CGCGAGTTCG GTTGTTGCTC GGTGCTGAAC CCGAGGAGGA ATCGGTCCGA
GCGATCACCT CGGGTGACTC CGATCAGGAC GCACGACGAG ACGCGGCAAT CGAACACCAC
CAGGCCTGGC TGGAAGCGGA GCGGGACACA ATGGGCTTTG CTCGTATTCC TACGGCCGAG
GCGAAGCGGA TGGTCGAGTG GCTGAAAAGC ATGGACGTCG AACAAAATCC AAGAGTCGAG
GTCCGTCGCT ACTCGGGTGG CTTCCTCCAC GGGAAGACCT ACCTCGTCGA GGACAACGCA
ACGCAGGCGG CGATCGCGGG GTCGTCGAAC ATGACCTACG CCGGCCTCGC CCGAAATGCC
GAGTTGAATC TCGGCACGGG TGGTGGGACG GGCGCGGCGG GAAAGGTGCG TGAGTGGTTC
GAGCACTACT GGTCACAGAG CGACTCGTAT GACCTTGCAG AGCTGTATGG CCGTCTGTGG
GATCCTCATA CGCCGTGGGC GATCTATCTT CGCATGCTTT GGGAACTGTA CGGCGAGCAT
CTCGATTCCG ACGAGAACCC TGAACCTCAC ACGCGCCTTG AGCTGACGCG CTTTCAGGCG
GATGGGGTGG TGCGTATGGA GCGCCTTCTC GACGAGCACG GCGGTGTCCT GGTCGCCGAT
GAGGTGGGAT TGGGCAAGAC CTACCTTGCC GGCGAGGTCA TCTACCGAAC GGCAAACATC
AATCGGCAAC GGGTGCTCAT CGTCGCGCCG GCCGCGCTGA AATCGTCGAT GTGGGAACCA
TTCTTGGAAT CCTACGACTT CAGCCGCTGG GTGAAGGTTT ACTCCTACGA GGAGGTACGC
AACCGCCTCG ACCCCGACAG GGGACCAGTT GATGCGTTCC TCCAAGAGGT CGCAGACTAT
TCACTCGTCG TCATCGACGA GGCACACAAC CTGCGCAACT CCGGAGCACA GCGTTCAGGT
GCCGTGGATC GAGTCATCAC GGCCGGCGGG TCCAAACGCG TTGTGCTGCT TACTGCTACG
CCGGTCAATA ACTCGCTCAC CGATCTTGAA ACTCTGGTGA AGTACTTCAT CCGCGACGAC
GCCCGCTTTG CGGCGCTGGG AATACCGAGC ATCCGCGAGT ACATCAAGCA GGCGCAGGCC
ATGGACCCCG CCAATCTGAC ACCCGAGCAT CTGTTTGACC TGATGGATCA GGTTGCCGTG
CGGCGCACCC GAAAGTTCGT CAAGGAGCAC TACGCCAACG AGCTGATCCG GGGCGCGGAT
GGGAAGCTGA CAACTCTGAA GTTCCCGCAG CCCAAGGTTC GCCGTATCGA CTACGACCTC
AACGATGACG GCCTGGCGCT CATTGACGCG ATGGTCTACG CGCTCGACGA CCCGACCGAT
CCACACGCCT CACGCGCGTG GGAAGAACGC AGTCGCGATC CGCAGCGGCT GATGCTCGCG
CGCTATCTCT CCAGCATGTA CACGGTCGAC CACGACTTGC AGGAATACCA GATCACAAAC
GCAGGCCTGC TTCGGTCTGG TCTCCTCAAG CGACTGGAGT CCAGTCCACA GGCGCTCCAC
GCCTCTCTGG AAAACATGAT CGCCTCCCAC GAGAGCTTCC TGGAGGCGCT CGGAAAGGGC
TTCGTTCTCA AAGGCGAAGC GCTGAGTGAA TGGGTCTCCT CCGACTCTGA CGACCTCGAC
GCCTTCGTGG CCGAATTCGA CAACGACGAA CAGATCGAAT CGGTCGACGG CTACCACCTC
ACCGAACTTC AGGGTGACGT CGAGTCCGAC ATCGCTCTGC TGTGTGAACT GCGAGATCTC
GCCCACCTTG TGATCGAAGG TGTCGAGCCC AAGGTTGAGC AACTCGTCGA GGAACTGACG
ACGATTGCGG CCGACGCGCA GCGCGTCGAC CCGCGCGGTC TCTCGCATGC CGACCGCAGG
AAAGTCATCG TCTTCTCGGC CTTCACCGAC ACGATCATCC CCATCCACGA CGCCGTCGTG
GAAGCAATCC AATCAGCGCC CGCAGGATCT CCGCTGGCCG ACTACCGGGC TCGCATCGCC
CCGCCAATCA TGGGCTCCTA CGCCAAAACC CACGAACGCG GAGCAACCGG CGGCGTCGAC
CAAGGAGGCC GAGCGTCAAC CATCGCCGGC TTCGCACCCG CGACGGCTGG ACCTCGAAAC
GCGAAGGGCG AGCCAGCGGC GAAGGACGAG TTCGACATCC TCTTCACCAC CGATGTGCTC
TCCGAGGGCG TGAACCTCCA ACAAGCCGGG CAGATGATCA ACTACGACCT GCCATGGAAC
CCCATGCGCA TCGTGCAGCG ACACGGCCGT GTCGACCGCA TCGGCTCCAA ACACGACTAC
GTCCACCTCG GGCTCTTCTT CCCGGCCGAA CGCCTCGACG CCCTGCTGGA CCTAGAGGCA
CGTCTGGAAG CAAAGCTAGC GCTAGCCGAT GCGGCAGTCG GGGCAGGGAA CGTACTGCCG
GGCCGCGGAC CAGGACACGA AGTGAATCTC ACCGACGACC AAGTCACCGA CGAGTTCGAG
AAGCTGCTCG ACGCCGGTGG ATCGAGTGCC TCACTCTCCG GCGAGGAGTA CCGTCGGCGA
CTGTCCAGTG CGTTCAACAT GGACCCGCTG CTGAAAGCCG ACATCCTCGG TCTCCCTTAC
GGTTCGGGAA GCGGATTCGT GAACCCAGTG GTGAACGGCA ACGGCTACGT CTTCTGTATC
AAGATCGGAA AGAGCCCGAA GCCCTGGTTC AGATACGTGC CGGTCGACGA CGACTGGTCG
CTCCGCCACA ACGAAGACGG CCACCCACTG ATCTCTTCGG ACACCCTGCT GTCCCTCCGC
GTCGCCGATC CACAGAACGC CAGCGCTGAT CGATGGCTCC CTGACGAGGT CTACGACCAC
GCCTTCGACG CGTGGGAGGT CGCCCGCGAC AGCGTCTACA ACGTCTGGCA GGAGCTAACC
GACCCGAACG CGTTCCAACC CGACCTGCCA CTGTCCTTCC GGGACGCATA CGCACTCGTG
TTCAAGAGAG GTGGATACCT GGGCAGGGAC GCTCAAATCG CGCTCGCCAA TCGCCTACGC
AGCGTCCCCT CCGCCAAAGT GTCGCGTCAG GTCCGCGGGG CAATCAACCA AGGTCGCACT
GACGAGGAAC GCATCAAGCT CATCACCGAG GTGCTCGACG AGGCCGGAAT CAGCGCACCA
CCGCCACGCG AACCCCTCCC CGATGTCGAG AAGCACGAAG TCCGCCTCGT GACCTGGCTC
GCCGTGAAAG GCACGCGGGC ACTTGAGGAG ACAGCACAGT GA
 
Protein sequence
MTQLPDFATN HASTEAGLTV ADKVNELFCL LRENKVTAPP IAIATAYVNP AGFALLADEL 
ELAPRVRLLL GAEPEEESVR AITSGDSDQD ARRDAAIEHH QAWLEAERDT MGFARIPTAE
AKRMVEWLKS MDVEQNPRVE VRRYSGGFLH GKTYLVEDNA TQAAIAGSSN MTYAGLARNA
ELNLGTGGGT GAAGKVREWF EHYWSQSDSY DLAELYGRLW DPHTPWAIYL RMLWELYGEH
LDSDENPEPH TRLELTRFQA DGVVRMERLL DEHGGVLVAD EVGLGKTYLA GEVIYRTANI
NRQRVLIVAP AALKSSMWEP FLESYDFSRW VKVYSYEEVR NRLDPDRGPV DAFLQEVADY
SLVVIDEAHN LRNSGAQRSG AVDRVITAGG SKRVVLLTAT PVNNSLTDLE TLVKYFIRDD
ARFAALGIPS IREYIKQAQA MDPANLTPEH LFDLMDQVAV RRTRKFVKEH YANELIRGAD
GKLTTLKFPQ PKVRRIDYDL NDDGLALIDA MVYALDDPTD PHASRAWEER SRDPQRLMLA
RYLSSMYTVD HDLQEYQITN AGLLRSGLLK RLESSPQALH ASLENMIASH ESFLEALGKG
FVLKGEALSE WVSSDSDDLD AFVAEFDNDE QIESVDGYHL TELQGDVESD IALLCELRDL
AHLVIEGVEP KVEQLVEELT TIAADAQRVD PRGLSHADRR KVIVFSAFTD TIIPIHDAVV
EAIQSAPAGS PLADYRARIA PPIMGSYAKT HERGATGGVD QGGRASTIAG FAPATAGPRN
AKGEPAAKDE FDILFTTDVL SEGVNLQQAG QMINYDLPWN PMRIVQRHGR VDRIGSKHDY
VHLGLFFPAE RLDALLDLEA RLEAKLALAD AAVGAGNVLP GRGPGHEVNL TDDQVTDEFE
KLLDAGGSSA SLSGEEYRRR LSSAFNMDPL LKADILGLPY GSGSGFVNPV VNGNGYVFCI
KIGKSPKPWF RYVPVDDDWS LRHNEDGHPL ISSDTLLSLR VADPQNASAD RWLPDEVYDH
AFDAWEVARD SVYNVWQELT DPNAFQPDLP LSFRDAYALV FKRGGYLGRD AQIALANRLR
SVPSAKVSRQ VRGAINQGRT DEERIKLITE VLDEAGISAP PPREPLPDVE KHEVRLVTWL
AVKGTRALEE TAQ