Gene Hoch_6896 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagHoch_6896 
Symbol 
ID8549320 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameHaliangium ochraceum DSM 14365 
KingdomBacteria 
Replicon accessionNC_013440 
Strand
Start bp9442269 
End bp9442760 
Gene Length492 bp 
Protein Length163 aa 
Translation table11 
GC content64% 
IMG OID646391560 
Productsingle-stranded nucleic acid binding R3H domain protein 
Protein accessionYP_003271252 
Protein GI262200043 
COG category[R] General function prediction only 
COG ID[COG1847] Predicted RNA-binding protein 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones17 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones25 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
GTGGCCCAAG CGAACAGTAA ATCTAACGAT CCGGTCGAGA GTGCGCGCGA GTTTCTCGCG 
GGCGTGCTCG ATCGCATGGA CATCGACGCC GACATCGAGA TCTTCGAGAA AGAGGACAAA
GTCGTCCTCG ACATCGATTG TGACGACGTC GATCGCGTCA TCGGCCGGCG CGGCCAGGTG
ATGGAAGCGC TACAGCACCT GGTCAGCAAG ATCTCGTATC GCGACCGCGG CGCTGGCAGC
AGCAAGCCGA TTCTGGTCGA CGCCGATGGC TATCGCGAGA AGCAGATCGA CAAGCTGGTC
GCGCTGGCCG AGCGCATGGC CGACCGGGCG CTCGACGACC AGGAGATCGT CGAGCTCAAC
CCGATGTCGT CGCACGACCG GCGTGTGGTC CACATGGCGC TGGCCGACTT CGACGGCGTG
AGCACGCGCA GCGAAGGCGA GGGCGAGGAC CGCCACGTGC TGATCGTCCC GGACTCGCTC
GCCGACGAGT GA
 
Protein sequence
MAQANSKSND PVESAREFLA GVLDRMDIDA DIEIFEKEDK VVLDIDCDDV DRVIGRRGQV 
MEALQHLVSK ISYRDRGAGS SKPILVDADG YREKQIDKLV ALAERMADRA LDDQEIVELN
PMSSHDRRVV HMALADFDGV STRSEGEGED RHVLIVPDSL ADE