| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Hoch_6895 |
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| Symbol | |
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| ID | 8549319 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Haliangium ochraceum DSM 14365 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013440 |
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| Strand | - |
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| Start bp | 9440816 |
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| End bp | 9442240 |
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| Gene Length | 1425 bp |
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| Protein Length | 474 aa |
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| Translation table | 11 |
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| GC content | 74% |
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| IMG OID | 646391559 |
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| Product | tRNA modification GTPase TrmE |
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| Protein accession | YP_003271251 |
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| Protein GI | 262200042 |
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| COG category | [R] General function prediction only |
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| COG ID | [COG0486] Predicted GTPase |
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| TIGRFAM ID | [TIGR00231] small GTP-binding protein domain
[TIGR00450] tRNA modification GTPase TrmE |
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Plasmid Coverage information |
| Num covering plasmid clones | 19 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 26 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGCTCTCCG CACAGCGCGA CACCATCGCC GCCATCGCCA CCCCGACCGG CACCGGGGGC
GTGGGCGTCG TGCGCATCAG CGGCCCGCAG GCGGGAGCCG TGCTCGGCCG TGTGCTCGCG
CGCGCGCCCG ACGACTTGCC GGACCGCGCG CTGGTCTACG GCCTGGCCCG CGACCGCGAC
GGCGGCCGGC TCGACGACGT GCTCGCCGTG CTCATGCGCG CGCCGCGCTC GTTCACGGGC
GAGGACGTCG CCGAGATCCA CGGCCACGGC GGCCCGGTGA ACATGTCGCG GCTCTTGCGC
GCGGTGCTCG AGCAGGGCGC GCGTCCCGCC GAGCCGGGCG AGTTCACGCG CCGCGCCTTC
GAAAACGGCA AGCTCGACCT GGTCCGCGCC GAGGCCATCC TCGACGTCAT CGAGGCCGGC
AGCGAGCGCG CCTGGCGCCT GGCCCAGGCC CAGCTCGCCG GCGACTTCGG CCAGCAGGTC
ACCGCGCTGC GCGCGCGCGC CACCTCGCTG CTCGCCGAGG TCGAGGCGTG CATCGACTTT
CCCGAGGAGG GCGAGGACTA CCTGGCCACC AGCGAGGTCG CCGCGCGTTG TCGGACACTT
GGACGAGAAC TGTCCGGATT CGCCGGTACC TTCGCCCTGG GCCGCGCTCT GCGCAGCGGC
ATCGAGGTCG CCCTCGTGGG CCCCGTGAAC GCCGGAAAGT CGAGTATTTT CAACGCCTTG
ATAGGTTCTG AGCGAGCCAT CGTGGACGCC GCACCCGGCA CCACGCGCGA CTACGTCGAG
GCCCGCGCGG TGTGGGACGG CGTGCCCGTG ACCGTCATCG ACACCGCCGG CGAGCGTGAC
GTTGCCGGCA GCCAGGCCGG CGAGCGCATC GAAGCCCGCG GCATCGAGAT GGGACGGGCG
CGCGCGGCGC AGGCCGATCT GCGCGTGCAT CTGCGCAGCG CGACGGGAGC CGGTGGCGCA
CAAGGCGAGG GCGGTGGGGA CGGCGCTGAC CGGGCACACG GCGCAGCCGG GACACAGGAC
GACGCCGGCG CGTGGTCGGC GGCGAGCGCG GACGAGCGCG AGCTGCAGGT GTGGAGCAAG
TGCGACCTGG GCGCGCCCGC GGACGGCGAC CCGCGGCCGC GGACCTCGGC CAGGACCGGC
GCCGGGCTCG ACGCGCTCAA GCAGCTCATC CTCGAGCGCG TATGCGGCGC GTCGCTCGAG
GCCGACGAGG GCCACGTGGT CACCAGCGAG CGCCAGCGCG ACCTGCTCGC GCACGCGGCC
GCGGCCTTCG AGCGCGCGGC CCAGGCCCGC GACGCGCGCG CGCCCATCGA GGTTCTCGCG
CTCGAGATCC GCGAGGCCAC CGAACAACTC GCGCGGCTCA TGGGCGAGCG CGTTGGCGAG
GAGGTCCTCG ACGACCTCTT CGGCCGCTTT TGCATAGGCA AGTAA
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| Protein sequence | MLSAQRDTIA AIATPTGTGG VGVVRISGPQ AGAVLGRVLA RAPDDLPDRA LVYGLARDRD
GGRLDDVLAV LMRAPRSFTG EDVAEIHGHG GPVNMSRLLR AVLEQGARPA EPGEFTRRAF
ENGKLDLVRA EAILDVIEAG SERAWRLAQA QLAGDFGQQV TALRARATSL LAEVEACIDF
PEEGEDYLAT SEVAARCRTL GRELSGFAGT FALGRALRSG IEVALVGPVN AGKSSIFNAL
IGSERAIVDA APGTTRDYVE ARAVWDGVPV TVIDTAGERD VAGSQAGERI EARGIEMGRA
RAAQADLRVH LRSATGAGGA QGEGGGDGAD RAHGAAGTQD DAGAWSAASA DERELQVWSK
CDLGAPADGD PRPRTSARTG AGLDALKQLI LERVCGASLE ADEGHVVTSE RQRDLLAHAA
AAFERAAQAR DARAPIEVLA LEIREATEQL ARLMGERVGE EVLDDLFGRF CIGK
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