| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Hoch_6886 |
|---|
| Symbol | |
|---|
| ID | 8549310 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Haliangium ochraceum DSM 14365 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_013440 |
|---|
| Strand | - |
|---|
| Start bp | 9428455 |
|---|
| End bp | 9429342 |
|---|
| Gene Length | 888 bp |
|---|
| Protein Length | 295 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 69% |
|---|
| IMG OID | 646391550 |
|---|
| Product | dimethyladenosine transferase |
|---|
| Protein accession | YP_003271242 |
|---|
| Protein GI | 262200033 |
|---|
| COG category | [J] Translation, ribosomal structure and biogenesis |
|---|
| COG ID | [COG0030] Dimethyladenosine transferase (rRNA methylation) |
|---|
| TIGRFAM ID | [TIGR00755] dimethyladenosine transferase |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 20 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 28 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGAGCGAGG GCGTGAACGA GGCCTTTCCC GACCCGCGCA CGCTGATGCG CAAGTACGGG
CTCGGCGCCA AGAAGTCGTG GGGCCAGAAC TTCCTCATCA GCGAGCGCGC CTACCGCGCC
ATCGTCGATG CTGCCGTGCG CGGCGGCGAC GACTGGGTGA TCGAGTTCGG CGCCGGGCTG
GGCACGCTGA CCATGCGTCT GGCCGAGCGC GTGCCCGACG GCAAAGTGCT GGCCGTGGAA
CGCGACCGCG AGATGGCCGA GGTGCTGCGC GGCGAACTCG GACACCTCGA CAATGTCGAG
ATCATCGAGG GCAACGCGCT CACCTACGAC ATCGCCATGG TCGGACGCTG GTACGGCGAG
CGCGTGTCGG TGTGCGGCAA CCTGCCGTAC AATATCGCCT CGCAGATCAT CATGCACATC
ATCGACGCGC GCGAGCACGT GGCCCGCGCT ACGGTCATGA TCCAGCGCGA GATGGCCGAC
CGCCTGGTAG CCGTGCCCGG TACCAAAGCC TACGGCGCGC TCGGCGTGCT GGTCGGCACC
TTCGCCGATG TCTCGACCGT CATCCACGTA CCGGCCAGCG GCTTCGTGCC CGCGCCCAAA
GTGTCGTCCA CCGTGGTCCG CCTCGACCTC TTGTCCGACG AACACATGCG CGTGCAGGTG
TCCGACTTCG CGCACTACGC CGACGTGGTC CACGGCGCCT TTGGCCAGCG GCGGAAGAAG
CTGCGCAACG CGCTGGGCGC GCGTTGGCCC ATGGACGTGG TCGACGCCGG GCTGAGCGAT
GCCGACATCG ACGGCGGCCG TCGCGGCGAG ACCCTCGACC GCGTGGAATT CGCCCGGCTG
GCCGACCACC TGCCCAAGCG GCCGCGCGAG CATGCCCGAA CTCCCTGA
|
|---|
| Protein sequence | MSEGVNEAFP DPRTLMRKYG LGAKKSWGQN FLISERAYRA IVDAAVRGGD DWVIEFGAGL
GTLTMRLAER VPDGKVLAVE RDREMAEVLR GELGHLDNVE IIEGNALTYD IAMVGRWYGE
RVSVCGNLPY NIASQIIMHI IDAREHVARA TVMIQREMAD RLVAVPGTKA YGALGVLVGT
FADVSTVIHV PASGFVPAPK VSSTVVRLDL LSDEHMRVQV SDFAHYADVV HGAFGQRRKK
LRNALGARWP MDVVDAGLSD ADIDGGRRGE TLDRVEFARL ADHLPKRPRE HARTP
|
|---|
| |