| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Hoch_6883 |
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| Symbol | |
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| ID | 8549307 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Haliangium ochraceum DSM 14365 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013440 |
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| Strand | - |
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| Start bp | 9425754 |
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| End bp | 9426398 |
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| Gene Length | 645 bp |
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| Protein Length | 214 aa |
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| Translation table | 11 |
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| GC content | 63% |
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| IMG OID | 646391547 |
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| Product | RNA polymerase, sigma-24 subunit, ECF subfamily |
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| Protein accession | YP_003271239 |
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| Protein GI | 262200030 |
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| COG category | [K] Transcription |
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| COG ID | [COG1595] DNA-directed RNA polymerase specialized sigma subunit, sigma24 homolog |
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| TIGRFAM ID | [TIGR02937] RNA polymerase sigma factor, sigma-70 family |
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Plasmid Coverage information |
| Num covering plasmid clones | 18 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 26 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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| |
Sequence |
| Gene sequence | TTGGCCACCA GCGCAGCATT AGCAGGACGA GGGGGACTCG GCGAAGAGGC CGATGAGGAT
CTCATGCTGC GCTACCAGAA CGGCGAGGTG CGGGCCTTCG AGATCCTGCT CACGCGCCAC
CGGCGGCCGA TCTTCAACTT CATCCTGCGC TTCGTCGGCG CGCGCGACCG CGCCGAGGAT
CTGATGCAGG AGACCTTTTT GCGCGTGGTC AAGAAGGCCG ACACCTACAA GAAGCAGGCG
AAGTTCACGA CCTGGCTGTA CACCATCGCG CGCAATCTCT GCGTGGATCA CAGCCGGCGG
CAGAAACATC GCAAGGCCAA GTCTCTGGAT CAGCCTATGG GCGGGGCAGG GGCCAGCGAT
GGTGACCGCA CGCTGCTCGA CACCGTGGCC GGCGACGAGC TGGCCTCGGA CCGCAAGGCC
ATCAGCCGCC AGCTCCACAT GGCCATGCAT CGGGCCATCG AGACGCTGCC CGATGAGCAG
CGCGAGGTGT TCCTGCTGCG CGAGTTCCAG GACTTGCCCT TCCGCGATAT CGGTGAGATC
GTGGGAGTCC CCGAAAACAC CGTAAAGAGC CGAATGCGTT ACGCTTTAGA CAAGTTGCGC
GGCGAGCTCG CGGAGTACAA AGACCTGGCG AAGTCGTTGC CGTAG
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| Protein sequence | MATSAALAGR GGLGEEADED LMLRYQNGEV RAFEILLTRH RRPIFNFILR FVGARDRAED
LMQETFLRVV KKADTYKKQA KFTTWLYTIA RNLCVDHSRR QKHRKAKSLD QPMGGAGASD
GDRTLLDTVA GDELASDRKA ISRQLHMAMH RAIETLPDEQ REVFLLREFQ DLPFRDIGEI
VGVPENTVKS RMRYALDKLR GELAEYKDLA KSLP
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