Gene Hoch_6881 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagHoch_6881 
Symbol 
ID8549304 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameHaliangium ochraceum DSM 14365 
KingdomBacteria 
Replicon accessionNC_013440 
Strand
Start bp9423595 
End bp9424335 
Gene Length741 bp 
Protein Length246 aa 
Translation table11 
GC content73% 
IMG OID646391545 
Productribonuclease HII/HIII 
Protein accessionYP_003271237 
Protein GI262200028 
COG category[L] Replication, recombination and repair 
COG ID[COG0164] Ribonuclease HII 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones26 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones25 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGACGCACA GGCACAGCAG TCGGACGACG CGGGCCCGCA CGCGCCTCAC CCTGGGGATT 
GACGAGGCCG GCCGCGGCCC GGTGCTCGGG CCCATGGTCA TGGCCGCCGT GTGCCTCGAC
AGCGGCGGCG CGCGCTGGCT CACGCGCACG GGCGTACGCG ACTCCAAGGC GTTTGGCGCC
TCGAGCAAAG CCCGCAGCGC GCGCGCCGAG CTCGCCGCCG AAGTGAGCGC GCGCGCCGTC
CATGCCGAGG TGCAGGTCAT CGACGTCGCC GTCATCGATC GCCGCGTGCG CCGCCACGAG
CTCAACCTGC TCGAGCGCGA GATCGCCGAG CAGCTCATCG CGCGCGCGCC CGCGGTCGAC
GCCATCATCG CCGATGGCAA GAACCTGTTC CGGCCGCTCT CCCAGCGCTA TCCCCACCTG
GAGGCATGCG ACGGCGGCGA GGCCCGGCAC GCCTCTGTGG CCGCGGCCTC GATCTTGGCC
AAGCATCGCC GCGACGAACT CTTCGCGTGC ATCGCCCAGC GCTACCAGCC GCTGTTCGGC
GAGCTGCGCG GCGGCGGCTA CGTCAACGAG GCCACGCGGC GCTTTCTGCG CGCCCACGTC
GAGCGCTTCG GCCGCCTGCC GCCCGAGGCC CGTCGCTCGT GGCCGTACGC GTATCTCGCC
GATTTGCTCG GGCCCGGCTT CGACCCCTTC GCCGACCTCG ACGATGGGGC GCCGGCGCCC
GGCCAGATGA CCCTGCTGTA A
 
Protein sequence
MTHRHSSRTT RARTRLTLGI DEAGRGPVLG PMVMAAVCLD SGGARWLTRT GVRDSKAFGA 
SSKARSARAE LAAEVSARAV HAEVQVIDVA VIDRRVRRHE LNLLEREIAE QLIARAPAVD
AIIADGKNLF RPLSQRYPHL EACDGGEARH ASVAAASILA KHRRDELFAC IAQRYQPLFG
ELRGGGYVNE ATRRFLRAHV ERFGRLPPEA RRSWPYAYLA DLLGPGFDPF ADLDDGAPAP
GQMTLL