Gene Hoch_6877 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagHoch_6877 
Symbol 
ID8549301 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameHaliangium ochraceum DSM 14365 
KingdomBacteria 
Replicon accessionNC_013440 
Strand
Start bp9417400 
End bp9418287 
Gene Length888 bp 
Protein Length295 aa 
Translation table11 
GC content68% 
IMG OID646391542 
Productpeptidase M48 Ste24p 
Protein accessionYP_003271234 
Protein GI262200025 
COG category[O] Posttranslational modification, protein turnover, chaperones 
COG ID[COG0501] Zn-dependent protease with chaperone function 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones25 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones21 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAACGGGA TCGACTTCGA CTTCCCTCTG TACATCCAGC ATCGCCGCGG CCAGGTCGAG 
CAGCGCGTGC GCGACGGCAG CGCCTACGCC TACAGCGGCG AGCGCAAAGT CCGTCGCACC
CTCGACAGCG CCAAACCCGT GGTGATCGCC CTCGAGGGCA CCACCCGGCT GTGGAAGAAC
GTGGCCAAAA CCGAGCTGCT CGGCACCGCG CTGCGCGCGA CCAGCCAGCA GTTCCCGCGG
CTGTTCGCGG CCACCCGCGA GGCCAGCGCG GCGCTGCGTA TGGAGGCTCC ACCCGTCTAC
GTCGCCCCGT CGAGTTCGCC GGTGCGCGCG CAGACTCTGG GCACCAACGA CGACGCGTAC
ATCGTCGTCA ACGCCGAGAT GATCGAGCAG CTCCGCGACA GCGAGCTGGT CACCCTCATC
GGCCACGAGC TCGGCCACCT GCAGAACAAC CAGGTGCTGT ACAACACCGC CCTCTACTAT
CTGACCGAGG CGGCCGCCAT GTTCGTGCGC TGGGCCGTAC AGCCGGCCAT CGTCACCCTG
CAGGCGTGGT CGCGGCGGGC CGAGATCACC TGCGATCGCG CCGCGCTGCT GTGCACGCGC
AACCTCGACG TCACCATGGC CGCGCTGATC AAGATCTCGC TCGGCCTCGA ACGCGACGTC
CAGATCGACG TCGACGAGTA CATCGCCAGC CTGCCCGAGA CCAAGCGCGG CGTCGGCCGC
TACGCCGAGC TGTTCCGCAC CCAGCCCTAT CTGCCCAAGC GCATCCAGGC GCTGCGCCGG
TTCGCCGACT CGGCGCTGTA CAAGTCCGCC CTCGGTGAGT CGACCGAAGG CGCGCCCTCC
ACCGCCACGG TCGACGCCGA GGTCGCCGAG ATTCTGAGCG TATTCTGA
 
Protein sequence
MNGIDFDFPL YIQHRRGQVE QRVRDGSAYA YSGERKVRRT LDSAKPVVIA LEGTTRLWKN 
VAKTELLGTA LRATSQQFPR LFAATREASA ALRMEAPPVY VAPSSSPVRA QTLGTNDDAY
IVVNAEMIEQ LRDSELVTLI GHELGHLQNN QVLYNTALYY LTEAAAMFVR WAVQPAIVTL
QAWSRRAEIT CDRAALLCTR NLDVTMAALI KISLGLERDV QIDVDEYIAS LPETKRGVGR
YAELFRTQPY LPKRIQALRR FADSALYKSA LGESTEGAPS TATVDAEVAE ILSVF