Gene Hoch_6874 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagHoch_6874 
Symbol 
ID8549298 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameHaliangium ochraceum DSM 14365 
KingdomBacteria 
Replicon accessionNC_013440 
Strand
Start bp9413995 
End bp9415533 
Gene Length1539 bp 
Protein Length512 aa 
Translation table11 
GC content74% 
IMG OID646391539 
ProductFHA domain containing protein 
Protein accessionYP_003271231 
Protein GI262200022 
COG category[T] Signal transduction mechanisms 
COG ID[COG1716] FOG: FHA domain 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones20 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones19 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
GTGCACATCC GCAAACGTAG AATTCTCCCC GTGGCAGGGC GGCCCCCCAT ACGCGGACCC 
GGCTCGGCGC GCGGTAGCTT CGGGGCCCGC GATGGCGACG AAGAGCAGAC GGCGATCGAG
ACCAATCCCG GCGAGTCGGT GTCGACGCTC ACCGGCGGAC CCGACAGCGA GTACCGCAGC
GGCGAGATCG AACCCAGCCG CGTATCGTCG CCCCCGGGCA ACAACTCCTC GGGCGACTGG
GAGGAGAAGA CCGTCGTCGA CGACGGACAG CTCTACAGCC CCAGCACCGG CACGCTGACC
GCCCAGGCCG GGGTCACCGC CGAAGAGGAA TACACGCTCG ACGACCAGCG CCGCGCCGGC
TCCGCGGTGT CGCGGCTACC GGCGCCGCCA ACGCCGCGGC CGATCGCGCC GGCGCGACCG
CGCGCGAGCG TCCCCGAAGC CGCGCGCGGC TCGCTCGAAG TCATCTCGGG CAACGACAAC
GGACGCTCGT TCCCCCTGCA CGGCACCGCG GTCACGATCG GTCGCGGCAT CGACAACGAC
GTCGTCCTCA CCGACATCGC GGTGTCGCGC AAACACCTCA CGCTCGAGTT CGACGGCTCG
CGCTATCGGC TCACCGACAA GGGCTCGGGC AACGGCACGC TGATCAACGA CCGGCTCGAG
ACCGGCAGCT CGCTGCTGCG ACACGACGAC CGCATCGAGA TCGGCAACAC TGTGATGCGC
CTCGAGCATC CCTCGAGCGC CGACGCGCCC GCCGACGCGC CCGCCAACGC GCCGACCTCG
CAGCGACCCA CGGCGCAGGC ACCGGCCGCC ATGCCGCCGA GTTCCGAGCG AACCACGGCG
CCGGAGAAGG CCGCCGAGCC GCCGGAGCAA CGCCCCACCG CGATGGAGTC CGCCGCCGAG
CCGACCCCCG GCCACGGCGA CGCCGACGCT CACCGCCGCT CCGGCCCCGG CACCAGCGCC
AGCCTCGAGG CCCTGGCCGG CGCGGCCACC GCGGGCGCCT CCGACAACGC GCCCGCCAAT
GCCCCGAGCG ACGCGCCGGC ACAAGCGCCC GCCCACGAAT CCGCGATACC CTGGTCGCCG
GCAGACGCGG CGCTTGCCCC CGCCGCCGCC GAACCGGGCC CGGGACCGCG CCTGCCGCAT
CCGCCGCTGC CGCTGCCGCA CCACGCGCTC GAGCGCCGCA AGCTGTACAT CGGCACCGGC
GCGACGCTCC TCGGCGTGAT CGCGGTCGCC GTGGTCGGCC TGCTGCTCGG CGACGATCCC
TCGATGGTGC CCGACGACGT ATCCCCGCCG GTGCGCCTCG AGTCTGTGCT GCAGCCGGTG
CGCGGCTGGC TGCGCGGCCC CGGCGAGCCG CTCGTGTTCG CCCCCGGCGC GAGCGGCGAC
AGCGCCGCGC TCGATCAGGC CGGCGACGCG GCCGCCGCTC AAATCGCTGG CGAGATCGAG
CCAGCCGAAG CCGAAGCCGC CGCCGAAGCC GCCGCCGAAG CCGAAAACAG GCCCGAGGGC
GGCGACGGCG ACAGCGACGA AGCCGACGAC GAGGAATAA
 
Protein sequence
MHIRKRRILP VAGRPPIRGP GSARGSFGAR DGDEEQTAIE TNPGESVSTL TGGPDSEYRS 
GEIEPSRVSS PPGNNSSGDW EEKTVVDDGQ LYSPSTGTLT AQAGVTAEEE YTLDDQRRAG
SAVSRLPAPP TPRPIAPARP RASVPEAARG SLEVISGNDN GRSFPLHGTA VTIGRGIDND
VVLTDIAVSR KHLTLEFDGS RYRLTDKGSG NGTLINDRLE TGSSLLRHDD RIEIGNTVMR
LEHPSSADAP ADAPANAPTS QRPTAQAPAA MPPSSERTTA PEKAAEPPEQ RPTAMESAAE
PTPGHGDADA HRRSGPGTSA SLEALAGAAT AGASDNAPAN APSDAPAQAP AHESAIPWSP
ADAALAPAAA EPGPGPRLPH PPLPLPHHAL ERRKLYIGTG ATLLGVIAVA VVGLLLGDDP
SMVPDDVSPP VRLESVLQPV RGWLRGPGEP LVFAPGASGD SAALDQAGDA AAAQIAGEIE
PAEAEAAAEA AAEAENRPEG GDGDSDEADD EE