Gene Hoch_6869 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagHoch_6869 
Symbol 
ID8549288 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameHaliangium ochraceum DSM 14365 
KingdomBacteria 
Replicon accessionNC_013440 
Strand
Start bp9404532 
End bp9404867 
Gene Length336 bp 
Protein Length111 aa 
Translation table11 
GC content63% 
IMG OID646391529 
Producthypothetical protein 
Protein accessionYP_003271226 
Protein GI262200017 
COG category[S] Function unknown 
COG ID[COG0718] Uncharacterized protein conserved in bacteria 
TIGRFAM ID[TIGR00103] DNA-binding protein, YbaB/EbfC family 


Plasmid Coverage information

Num covering plasmid clones19 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones16 
Fosmid unclonability p-value0.273576 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGTCTGACA AGAACATGCC CGATCTGGGC AACCTCATGA ACCTGGCGCA GAAGCTCCAG 
GGCGACGTCA ACAAGCTGCA GGACGAGCTG TCGCGCATGG AGTGCGAGGC CTCGTCGGGC
GGCGGCATGG TCACCGCCCG GGTCAACGGC GAGTATCAGG TGGTCTCGAT CGCGATCGAC
AAGAACGTCG TCGACCCCGA GGACGTGGGC ATGCTGCAGG ATCTCGTGGT CGCCGCGGTC
AATCAGGCGA TGACCAAGAT GCGCGACACC GCGCAGCAGG AGATGGCCAA GCTCACCGGC
GGGATCAACG TCCCCGGTAT GCCCAAGATG TTCTGA
 
Protein sequence
MSDKNMPDLG NLMNLAQKLQ GDVNKLQDEL SRMECEASSG GGMVTARVNG EYQVVSIAID 
KNVVDPEDVG MLQDLVVAAV NQAMTKMRDT AQQEMAKLTG GINVPGMPKM F