| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Hoch_6858 |
|---|
| Symbol | |
|---|
| ID | 8549277 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Haliangium ochraceum DSM 14365 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_013440 |
|---|
| Strand | + |
|---|
| Start bp | 9393076 |
|---|
| End bp | 9394014 |
|---|
| Gene Length | 939 bp |
|---|
| Protein Length | 312 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 73% |
|---|
| IMG OID | 646391518 |
|---|
| Product | GrpE protein |
|---|
| Protein accession | YP_003271215 |
|---|
| Protein GI | 262200006 |
|---|
| COG category | [O] Posttranslational modification, protein turnover, chaperones |
|---|
| COG ID | [COG0576] Molecular chaperone GrpE (heat shock protein) |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 20 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 12 |
|---|
| Fosmid unclonability p-value | 0.0571011 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGAACTACT TCGACAGACC GTGGGGCTTT CCGTTCGGTC GGCCTCGCCA GATTCGCACC
CAGCGTCCCT TCCAGGAAGT CACGCCGGGC TGGCAGCGCC CACAGCGTCC CGGCCCGCAG
CGGGTCGCTC CCGGACCTGT GCCGCCCTCG CGGCCGTTCG CCGCAAGCGC CGGCAGCCAG
CCGCCGCGCC GTCCCGGCAA CCGCGGCGAC CTGGTCGACC TCCTCGAGTT CGATCGGCGC
CGCCGCGAGC CAGCCGCTCG CGAGCCCAGC ACCCGCGAGC AGCCCGCGCG CGAGCGACTC
GACAGTCGAC ACACCCCCGC GCAGACCGCG CGCGAGCATG TCGACAGTCG ACACACCCCC
GCGCAGACCG CGCGCGACCA ACTCGACAGT CGACATGGCT CTGCGCACCC TGCGCGCGAC
CAACTCGAGA GTCGACTCGC CGAAATGCGC GCCGAACTCG AGGCGACGCG CGCCGAACTC
GCCACCGCCA AGCTCGAGGC GCGCGAGGCT GCGGTGCGCG CGCACGGCGC CGACGACGAG
CTCGAGCGCG CCAAAGCGCG CATCGAGAAG GAGTCCAAGC GGCAGATCGA ATTGCGCACG
CAGCGGCTGT TGCTCGACTT TCTCGAGGTC CTCGACGACC TCGAGCGAGC GCGCGCCTCG
GCCGCGAAGG AGGGCGCCGG CGGCGACAGC GGCGACGCCA TCGTCCAAGG GCTCGAGCTG
GTCCGCAAAG GCTTCGAGCT CAAGCTCGCC GGCCACGGGG TCGAGCACGT GCCCGCGCTC
GGCGCCGCCT TCGACCCCAG CGTGCACGAG GCCATGGGCC TGGTCCCGGT CAGCGATCCC
GCGCAGAACG ACACCGTGGT GGCCGTGCTG AGCGAGGGCT ACCGCCTCGG TGACGAGGTC
CTGCGTCCGG CGCGCGTGAT GATCGGCCGC CACGGCTGA
|
|---|
| Protein sequence | MNYFDRPWGF PFGRPRQIRT QRPFQEVTPG WQRPQRPGPQ RVAPGPVPPS RPFAASAGSQ
PPRRPGNRGD LVDLLEFDRR RREPAAREPS TREQPARERL DSRHTPAQTA REHVDSRHTP
AQTARDQLDS RHGSAHPARD QLESRLAEMR AELEATRAEL ATAKLEAREA AVRAHGADDE
LERAKARIEK ESKRQIELRT QRLLLDFLEV LDDLERARAS AAKEGAGGDS GDAIVQGLEL
VRKGFELKLA GHGVEHVPAL GAAFDPSVHE AMGLVPVSDP AQNDTVVAVL SEGYRLGDEV
LRPARVMIGR HG
|
|---|
| |