| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Hoch_6855 |
|---|
| Symbol | |
|---|
| ID | 8549274 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Haliangium ochraceum DSM 14365 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_013440 |
|---|
| Strand | - |
|---|
| Start bp | 9390556 |
|---|
| End bp | 9391149 |
|---|
| Gene Length | 594 bp |
|---|
| Protein Length | 197 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 73% |
|---|
| IMG OID | 646391515 |
|---|
| Product | transferase hexapeptide repeat containing protein |
|---|
| Protein accession | YP_003271212 |
|---|
| Protein GI | 262200003 |
|---|
| COG category | [M] Cell wall/membrane/envelope biogenesis |
|---|
| COG ID | [COG1044] UDP-3-O-[3-hydroxymyristoyl] glucosamine N-acyltransferase |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 20 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 13 |
|---|
| Fosmid unclonability p-value | 0.0929755 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGGCTGCAC CTGACTACTA CGTCCACCCC TCGGCCGTGG TCGATCCCGG CGCCCGCATC
GGCCCCGGCA CCAAGATCTG GCACTTCGCG CACGTGATGT CGGGCGCCGT CATCGGCGGC
GGCTGCGTGG TCGGCCAGGG TTGCTACATC GGCAACGTGC GCATCGGCGA GCGCGTGCGC
ATCCAGAACA ACGTGTCGGT GTACGACGGC GTCACCCTCG AGGACGACGT CTTCGCCGGG
CCGAGCTGCG TGTTCACCAA CGTCCTCAAC CCGCGCGCCG AGGTCGAGCG CAAGCACGAG
TTTCGGCCCA CGCTGGTGCG CCGCGGCGCC ACCATCGGCG CCAACGCGAC CATCGTATGC
GGCGCGGTGC TCGAGCCCTA CGCGTTCATC GGCGCCGGCG CCGTGGTCCG CGGCGAGGTC
GCCGCCCACG CGCTCATGGT CGGCGTGCCG GCGCGCCGCA TCGGCTGGAT GTGCGCCTGC
GGCGAGCGCC TGGACCAAGC CGCGGCCGCG GGCAACTACG CGTGCGCGGC CTGCGGGCGC
GAGTACGCGC GCATCGGCGA CGGGCTGGCC GCGCTCAGGT CTCCTGGCGC GTGA
|
|---|
| Protein sequence | MAAPDYYVHP SAVVDPGARI GPGTKIWHFA HVMSGAVIGG GCVVGQGCYI GNVRIGERVR
IQNNVSVYDG VTLEDDVFAG PSCVFTNVLN PRAEVERKHE FRPTLVRRGA TIGANATIVC
GAVLEPYAFI GAGAVVRGEV AAHALMVGVP ARRIGWMCAC GERLDQAAAA GNYACAACGR
EYARIGDGLA ALRSPGA
|
|---|
| |