Gene Hoch_6854 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagHoch_6854 
Symbol 
ID8549273 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameHaliangium ochraceum DSM 14365 
KingdomBacteria 
Replicon accessionNC_013440 
Strand
Start bp9389994 
End bp9390575 
Gene Length582 bp 
Protein Length193 aa 
Translation table11 
GC content70% 
IMG OID646391514 
Producthypothetical protein 
Protein accessionYP_003271211 
Protein GI262200002 
COG category[R] General function prediction only 
COG ID[COG1611] Predicted Rossmann fold nucleotide-binding protein 
TIGRFAM ID[TIGR00725] conserved hypothetical protein, DprA/Smf-related, family 1
[TIGR00730] conserved hypothetical protein, DprA/Smf-related, family 2 


Plasmid Coverage information

Num covering plasmid clones22 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones13 
Fosmid unclonability p-value0.0909873 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCAACGGA TCTGTGTGTA CTGCGGCTCG CGCCCAGGCG GCCGCTCCAC CTACGTCGAA 
AGCGCCCGCG CGCTCGGCGC CGCGCTGGTC GAACGCGGTA TCGGCCTGGT CTACGGCGGC
GCCGGCATCG GCGTCATGGC CGCGGTCGCG GATGCCGTGC TCGCGGCCGG CGGCGAGGCC
ATCGGCGTCA TCCCCTCGGC CCTGGTCGAG CGCGAGCTCG CCCACCCCGC GCTCAGCGAG
CTGTTCGTCG TCGGCTCGAT GCACGAGCGC AAAGCCAAGA TGGTCGATCT GTCCGACGGC
TTCATCGCCC TGCCCGGCGG CTTCGGCACC CTCGACGAGC TGTTCGAGGT GCTGACCTGG
GCCCAGCTCG GCATGCACGC CAAGCCCATC GGCATGCTCG ACGTCGACGG CTATTACCGC
GATCTGTTCG CATTCATCGA CCGCGCTGTC GCCGAGCAGT TCGTGCGCGA CAAGCACCGC
GATCTGGTGC TGCGCGGGTC CACGCCGGCA GCGCTGCTCG ACGCCATGGC CGAATTCCAG
CCCATCCTGC TGCCCAAGTG GATCACGCGC CAGGAGACCT GA
 
Protein sequence
MQRICVYCGS RPGGRSTYVE SARALGAALV ERGIGLVYGG AGIGVMAAVA DAVLAAGGEA 
IGVIPSALVE RELAHPALSE LFVVGSMHER KAKMVDLSDG FIALPGGFGT LDELFEVLTW
AQLGMHAKPI GMLDVDGYYR DLFAFIDRAV AEQFVRDKHR DLVLRGSTPA ALLDAMAEFQ
PILLPKWITR QET