Gene Hoch_6848 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagHoch_6848 
Symbol 
ID8549267 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameHaliangium ochraceum DSM 14365 
KingdomBacteria 
Replicon accessionNC_013440 
Strand
Start bp9383826 
End bp9385232 
Gene Length1407 bp 
Protein Length468 aa 
Translation table11 
GC content70% 
IMG OID646391508 
Producthypothetical protein 
Protein accessionYP_003271205 
Protein GI262199996 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones18 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones11 
Fosmid unclonability p-value0.0313239 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCCCTCTC GCCCGCGTGT CGTCTCCGCC GTCCCTGTCT CGCGTCTCTT CGCGGGCGCA 
TCGCTCGCCG TGCTGCTCGG CGGCTGCGTC CAGATCCTCG GCATCGAGGG CCTGTCGCCC
GGCGACGGCG ACGCGGGTCC GCGCAGCGAT GGCGGCGTGC CCGTCGATGC CCGCATTGAC
CCGCCCGCCG ATGCCCTCAT CGATGCGCCC GTCGACGCGC CGACGGCCGA CCTGAGCTGC
GCCGAGGGCG AGCTGAGCGA GCCCCTCGGC AGCTTCACGA TCGACACCAG CCCGGCCGGC
GACGACTTTT CGGCCACCTG CGGCGGCGCC GGCAGCCCCG ACAGCGCGAT CGCGTGGCAC
GCGCCGGTCA CCGACTACTA CGTCTTCCAC ACCTTCGGCT CCAACTACGA CACCGTGCTG
GCGCTGTTCG GCGAGTGCGA AGGCCAGGAG CTGGCGTGCA GCAACAACGT CGGCCAGTCG
GTCCAGTCCG AAGTCGTGCA CAAGTTCATA CAGGGACAGG GCGCGCTGCT CTTACTCGAC
GGCGCGGTCG GCGACAGCGG CTCGACCCAG CTCAACATCG AGCGCGTGAG CTGCCCCAGC
GCCGACCTCG AGGGCCAGAG CTTCCCGGTG CAGCTCTCGA CCCTGGGCTT TGGCGACGAC
TTCAGCGGCG CCTGCGGCGG CAGCGGCGCC GAGGACCGCG CCTACCACTG GGTCGCGCCC
GCCGACGGCC TGTACTATTT CCGCGCCACC TCGGAGGTGT TCAAGCCCAT CGTCTCGGTG
GTCGATGGCC CGCGCTGCAG CGACCTCGTC CTCGGCTGCA ACCTGGCCGC GGCCGGCGAT
CTCGGCGCCG AGGTGGTGCG CTTTCTGCGC GCCGGCCAGG TCGTGAGCGT GCTGATCGAC
GGCGACAGCA GCGGCGGCAG CAACGACGCC GGCCTGTTCG AGCTCGACAT CGGCATCCGC
GAGGCGCCGA GCTGCCCGGC GGGCGAGCTG ACCCTGGAGA CCGGCATCAT CGATAGCTTC
GCCAGCCAGC GCAGCCTGTC GCCGAGCTGC GGTGCGGTGT ACAACTACGG CGCCTTCGGC
GGCGAGGTCG AGGCCCGCGA TAAGACCTAT CGCGTGACCA TCCCGGCCGA TGGCTCGTGC
TTCCGCTCCT ACGAGTTCCA GGCGACCTCC GACAGCGAGC AGGTCCTCAT CTACGCGCTG
CGCGGCTCGG ACTGCGGCGG CGAGGAAGTT CAGTGCGCGC TCGGCGTCGG CGATGCAACC
GGCGGCCAGG CCAGCGCGTC GATCTCGCTG TCGGCACTCG ACGACGAGGA GCAGGAGTTC
ACCATCGTCG TCGTCGACCC GGCCGCACCT TTCGCGGGCG CCGAGAACTT CACCGTACAG
TCGTTCCGCT ACGAGGCCTG TCCGTAA
 
Protein sequence
MPSRPRVVSA VPVSRLFAGA SLAVLLGGCV QILGIEGLSP GDGDAGPRSD GGVPVDARID 
PPADALIDAP VDAPTADLSC AEGELSEPLG SFTIDTSPAG DDFSATCGGA GSPDSAIAWH
APVTDYYVFH TFGSNYDTVL ALFGECEGQE LACSNNVGQS VQSEVVHKFI QGQGALLLLD
GAVGDSGSTQ LNIERVSCPS ADLEGQSFPV QLSTLGFGDD FSGACGGSGA EDRAYHWVAP
ADGLYYFRAT SEVFKPIVSV VDGPRCSDLV LGCNLAAAGD LGAEVVRFLR AGQVVSVLID
GDSSGGSNDA GLFELDIGIR EAPSCPAGEL TLETGIIDSF ASQRSLSPSC GAVYNYGAFG
GEVEARDKTY RVTIPADGSC FRSYEFQATS DSEQVLIYAL RGSDCGGEEV QCALGVGDAT
GGQASASISL SALDDEEQEF TIVVVDPAAP FAGAENFTVQ SFRYEACP