| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Hoch_6694 |
|---|
| Symbol | |
|---|
| ID | 8549111 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Haliangium ochraceum DSM 14365 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_013440 |
|---|
| Strand | - |
|---|
| Start bp | 9177039 |
|---|
| End bp | 9178544 |
|---|
| Gene Length | 1506 bp |
|---|
| Protein Length | 501 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 72% |
|---|
| IMG OID | 646391353 |
|---|
| Product | Carboxypeptidase Taq |
|---|
| Protein accession | YP_003271052 |
|---|
| Protein GI | 262199843 |
|---|
| COG category | [E] Amino acid transport and metabolism |
|---|
| COG ID | [COG2317] Zn-dependent carboxypeptidase |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 19 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 21 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGCTGGCGA GCATGGACGC GTACCGACGC CTCGAAGACC ATCACCGACA GCTCTTTCAC
CTCGACCACG TCAGCGCCAT CACCTCGTGG GATGAGGCCA CCATGATGCC CAGCGGCGGC
GGCGCGGCCC GCTCCGACGC CCTGGCGACC CTGGCCGAGC TGCGCCACGA GCGCGCCTGC
GCGCCGGAGC TGGGCGCGCT CTTCGACGAG GCCGCCGGCG GCCAGCTCGA CGAGTGGCAG
CGGGCCAACC TGGCGCACAT GCGCCGCGCG TGGCTGCGCA ACACCGCGCT GCCCGTGGCC
CTGGTGGGCG CGCGCTCGCG GGCGCGCTCG CGCTGCGAGC AGGCCTGGCG CACGCAGCGC
GCCAGCGGCG ACTGGGCCGG CTTTCAGCCG CTGCTCGAGG AGGTGGTCAA GATCGAGCGC
GAGGTCGCCG GCATTCTCGG CCAGGCCTTC CAGTGCGCGC CCTACGACGC GCTGCTCGAC
GACTACAACC CCGGCCTGCG CCAGCAGCAT ATCGACCCGG TGTTCGAAAA ACTGGGCGCG
TTCTTGCCCG ACTTCATCGA GCGCGCGGTG CAGCGCTCGG ACGCGCGCGC GGTACAGGCG
CCCAGCGGGC CGTTTCCGGT GGCCGCGCAG CGCGCGCTGT GCACGCGCTT GATGGGCGCG
CTCGGCTTCG ACTTCGAGCG CGGTCGCCTC GACGTGAGTC ACCATCCCTT CTGCGGCGGC
GTGCCGCGCG ACGTGCGCAT CACCACCCGC TACGACGAGG GCGACTACAC CACGGCGCTG
CTCGGCCTGG TGCACGAGAC CGGACACGGC CGCTACGAGC AGAACCTGCC CGAGGCCTGG
GTGGAACAGC CGGTGGGCGC GGCCCACGGC ATGGCCGTGC ACGAGAGCCA GAGCCTGCTG
TTCGAGATGC AGGTCGGCCG CAGTCAGCCC TTCATGCGCT TCGCCGCGCC GCTGATCGCC
GAGGCCATGG ACCCGGAGGG CAAGCAGCCG GCCGCGTTCA CGCCCGAGAA CCTGTACGCC
GGCCAGATCC GGGTGACGCG TTCGCTGATC CGCGTGGACG CCGACGAGGC CACCTACCCG
TCGCACATTC TGCTGCGCTA CGAGCTCGAG AAGGAGCTGA TGAGCGGGGC CCTCGAGGTC
GCCGATATCC CGGCGCGCTG GGACGAGGGC ATGCAGCGCT ACCTCGGCCT CGACACCCGC
GGCAACTTCC GCGACGGCTG CATGCAGGAC GTGCACTGGC CCGCGGGCCT GTTCGGCTAT
TTTCCGAGCT ACACCCTGGG CGCCATCATC GCCGCCCAGC TCTTCGCGGC GCTGCGCCAG
GCCGTGCCCG ATGTCGATGA GCAGATCGCG GCCGGCGATT TCGCCGCGCT CAGCGACTGG
CTGCGGCGGG CCATCTGGTC GCAGGCCAGC CGCTACGATC TCGACGCGCT GCTCGAGCAC
GCGACCGGCG CGCCGCTGAG CGTGGACGCC TATCTGGCGC ACCTCGAGCG CCGCTACCTG
AAGTAG
|
|---|
| Protein sequence | MLASMDAYRR LEDHHRQLFH LDHVSAITSW DEATMMPSGG GAARSDALAT LAELRHERAC
APELGALFDE AAGGQLDEWQ RANLAHMRRA WLRNTALPVA LVGARSRARS RCEQAWRTQR
ASGDWAGFQP LLEEVVKIER EVAGILGQAF QCAPYDALLD DYNPGLRQQH IDPVFEKLGA
FLPDFIERAV QRSDARAVQA PSGPFPVAAQ RALCTRLMGA LGFDFERGRL DVSHHPFCGG
VPRDVRITTR YDEGDYTTAL LGLVHETGHG RYEQNLPEAW VEQPVGAAHG MAVHESQSLL
FEMQVGRSQP FMRFAAPLIA EAMDPEGKQP AAFTPENLYA GQIRVTRSLI RVDADEATYP
SHILLRYELE KELMSGALEV ADIPARWDEG MQRYLGLDTR GNFRDGCMQD VHWPAGLFGY
FPSYTLGAII AAQLFAALRQ AVPDVDEQIA AGDFAALSDW LRRAIWSQAS RYDLDALLEH
ATGAPLSVDA YLAHLERRYL K
|
|---|
| |