Gene Hoch_6663 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagHoch_6663 
Symbol 
ID8549080 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameHaliangium ochraceum DSM 14365 
KingdomBacteria 
Replicon accessionNC_013440 
Strand
Start bp9134322 
End bp9135566 
Gene Length1245 bp 
Protein Length414 aa 
Translation table11 
GC content71% 
IMG OID646391323 
Productserine/threonine protein kinase 
Protein accessionYP_003271022 
Protein GI262199813 
COG category[K] Transcription
[L] Replication, recombination and repair
[R] General function prediction only
[T] Signal transduction mechanisms 
COG ID[COG0515] Serine/threonine protein kinase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones13 
Plasmid unclonability p-value0.997468 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones25 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
GTGCCGGGCC TGCGCTACCC ACCGCGCCCG GCTTTGCGGT ACAACCCGGC CGTGGATTTC 
GTCGCCATTG TCGCCCTGAT CATGGTCTTC GGGCCCTTCT TCTACGGGGT CAAACGCCGC
TACGACCTCA AAGAGAAGCA ACTAGAGGCT AATCGCCCGC CCGAGCCCAA GCTGCTCGAG
GCCCACGAGG CCGAGCGCGC GCGGCTGCTC GAGCGCATCG AGAACCTCGA GGCCATCGTC
TGCAACAACG ACTACGAGCT CAACATGCGC ATCGCCCAGC TCGCCGAGAC CCAGAGCGCG
GCCGGCGCGC TGCAGGCGGC GCCCCAGGCG ATCGCCGACG ACGGCACCGG TCCGACGCTG
GACGCGCCCC GCGACGACCT GGCCGGGCGT GCGGCCTCGG TGCGCGCGGT GACCTCGGCC
ACCGCCGAGC TGCGCGTGGG CGCCCGCCTG GCCGGGCGCT ACACCATCGA GCGCCTGCTC
GGCCGCGGCG GCATGGGCGC CGTGTACCTG GCCCACGACC AGAGCCTCGA TGAGCAGGTC
GCGCTCAAGG TCATCTCGTC CACCTGGCAC CACGATCACA AGAGCGTGAG CGAGCGCTTC
CGCCGCGAGG TCGCGGCCGC GCGCAAGGTG TCCTCGCCGC ACGTCATCCG CCTGCACGAC
CTGGGCGAGG ACGACAGCGG CCTGCTGTAT CTTTCGATGG AGTACTTCGC CGGCCAGACC
CTGGCCGAGA TGGTCGAAAA AAACGGCCCG CTGTCGCCAG AGGCGCTGCG CGACATCCTC
GGCGGCGTGT GCGCCGGGCT CACGGTCGCC CACCAGGCCG GCGTGGTCCA CCGCGACCTC
AAACCGCAAA ACGTCCTGGT GGACGAAAAA CGCTCGGTCA AGCTCATCGA CTTCGGCCTG
GCCACGACCT CGCTGGCGCC CGGACTCACG GCCACCGGCA TGCTGCTGGG CACGCCGCAC
TACATGTCGC CCGAGCAGGT GCGCGGCCGC CCGGTGACCG CGCGCAGCGA CATCTACGCC
CTGGGCGCGC TCGCGTTCTT CGCCGCCACC GGCCGGGCGC CCTTCACCGG CGACAACCCC
ATCGCCATCA GCTTCGCCCA TACGTCCGAA ATCCCGCCGC GTGCGCGCAG CCTGCGCTCG
TCGCTGAGCG AGGCGCTCGA CGACATGATC GCGGCCGCCC TGGCCAAAGA TCCGGGCGAG
CGACCGCGCA GCGCCGACGA GTTCCGCAAA GCGCTCAGCG CGTGA
 
Protein sequence
MPGLRYPPRP ALRYNPAVDF VAIVALIMVF GPFFYGVKRR YDLKEKQLEA NRPPEPKLLE 
AHEAERARLL ERIENLEAIV CNNDYELNMR IAQLAETQSA AGALQAAPQA IADDGTGPTL
DAPRDDLAGR AASVRAVTSA TAELRVGARL AGRYTIERLL GRGGMGAVYL AHDQSLDEQV
ALKVISSTWH HDHKSVSERF RREVAAARKV SSPHVIRLHD LGEDDSGLLY LSMEYFAGQT
LAEMVEKNGP LSPEALRDIL GGVCAGLTVA HQAGVVHRDL KPQNVLVDEK RSVKLIDFGL
ATTSLAPGLT ATGMLLGTPH YMSPEQVRGR PVTARSDIYA LGALAFFAAT GRAPFTGDNP
IAISFAHTSE IPPRARSLRS SLSEALDDMI AAALAKDPGE RPRSADEFRK ALSA