Gene Hoch_6640 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagHoch_6640 
Symbol 
ID8549057 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameHaliangium ochraceum DSM 14365 
KingdomBacteria 
Replicon accessionNC_013440 
Strand
Start bp9101208 
End bp9102278 
Gene Length1071 bp 
Protein Length356 aa 
Translation table11 
GC content72% 
IMG OID646391300 
ProductDegT/DnrJ/EryC1/StrS aminotransferase 
Protein accessionYP_003270999 
Protein GI262199790 
COG category[M] Cell wall/membrane/envelope biogenesis 
COG ID[COG0399] Predicted pyridoxal phosphate-dependent enzyme apparently involved in regulation of cell wall biogenesis 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones11 
Plasmid unclonability p-value0.33211 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones
Fosmid unclonability p-value0.000644829 
Fosmid HitchhikerYes 
Fosmid clonabilityhitchhiker 
 

Sequence

Gene sequence
ATGCGCGTAC CTCTGGTAGA CCTCGGCCCC GAAACCGCGC TCCTGCGCGA ACAGCTCACC 
GCCGCCCTGG CCCGCGTGCT CGACAGCGGA CGTTTCATCG GCGGACCCGA AGTCGAAGCG
CTCGAGGCCG AGCTTGCTCC GCTCGCCGAC GCCCGCGCGG TCGTCGGTGT GTCGTCGGGT
TCGGACGCGC TGCTGGCCGC GCTCATGGCG CTCGACATCG GCCCCGGTGA TGAGGTCGTG
ACCACGCCCT TCACCTTCTT CGCCACCGCG GGTGCCATCG CCCGGCTCGG TGCGCGTCCG
GTGTTCGCCG ACATCGATGA GCGCTCGTAC AACCTCGACC CCGCCGCCGC CGCCAGCGCC
ATCGGCCCGC GCACCAAGGC GCTGCTGCCC GTGCACCTCT ACGGCCGCCC GGCCGAGCTG
CCGGCCATCG ACGGCATGCC GGTGGTCGAA GACGCAGCCC AGAGCTTGAG CGCGTCGCCC
GTGCGCGGCA TCTGCCAGTG CGTCAGCTTC TTTCCCACCA AGAACCTGGG CGCGCTCGGC
GACGCCGGCG CCGTGCTCAC GCGCGACGAG GAGTTTGCCG CGCGCGTCCG GCTGCTGCGC
ACGCACGGCG CACAGCCCAA ATACGTGCAC GCGCTCATCG GCGGCAACTT CCGCATCGAC
GCCATGCAGG CCGCCTTGCT GCGGGTCAAG CTGCCGCATC TGGCGCGCTG GAACCAGGAG
CGCCGCGCCC GGGCCGCGCG CTACCGCGCG TGCTTCGCGG CCGCCCGCGT GCCCGCCGAG
CTGCGCTTGC CCGAGGACGT TTCCGACCAC GTGTACCACC AATTCGTGGT CCGCGCGCCG
CGCCGCGACG CGCTGCGCGA CTTTCTGGCC GAGCGGGGCG TGAGCACCGA GGTCTATTAC
CCGGTGCCCC TGCATCTGCA GGCCTGCTTC GCCGATCTCG GCTACCGAGC GGGCGCGTTT
CCCGTGAGCG AGGCGGCGAG CCGCGAGGCG TTGGCGTTGC CGATTCACCC CGGCCTACCC
GGCGACGCAC AGGACTACGT CGTCGAGCAG ATCGCCGCCT TCTATCAATG A
 
Protein sequence
MRVPLVDLGP ETALLREQLT AALARVLDSG RFIGGPEVEA LEAELAPLAD ARAVVGVSSG 
SDALLAALMA LDIGPGDEVV TTPFTFFATA GAIARLGARP VFADIDERSY NLDPAAAASA
IGPRTKALLP VHLYGRPAEL PAIDGMPVVE DAAQSLSASP VRGICQCVSF FPTKNLGALG
DAGAVLTRDE EFAARVRLLR THGAQPKYVH ALIGGNFRID AMQAALLRVK LPHLARWNQE
RRARAARYRA CFAAARVPAE LRLPEDVSDH VYHQFVVRAP RRDALRDFLA ERGVSTEVYY
PVPLHLQACF ADLGYRAGAF PVSEAASREA LALPIHPGLP GDAQDYVVEQ IAAFYQ