Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Hoch_6640 |
Symbol | |
ID | 8549057 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Haliangium ochraceum DSM 14365 |
Kingdom | Bacteria |
Replicon accession | NC_013440 |
Strand | + |
Start bp | 9101208 |
End bp | 9102278 |
Gene Length | 1071 bp |
Protein Length | 356 aa |
Translation table | 11 |
GC content | 72% |
IMG OID | 646391300 |
Product | DegT/DnrJ/EryC1/StrS aminotransferase |
Protein accession | YP_003270999 |
Protein GI | 262199790 |
COG category | [M] Cell wall/membrane/envelope biogenesis |
COG ID | [COG0399] Predicted pyridoxal phosphate-dependent enzyme apparently involved in regulation of cell wall biogenesis |
TIGRFAM ID | |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 11 |
Plasmid unclonability p-value | 0.33211 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | 7 |
Fosmid unclonability p-value | 0.000644829 |
Fosmid Hitchhiker | Yes |
Fosmid clonability | hitchhiker |
| |
Sequence |
Gene sequence | ATGCGCGTAC CTCTGGTAGA CCTCGGCCCC GAAACCGCGC TCCTGCGCGA ACAGCTCACC GCCGCCCTGG CCCGCGTGCT CGACAGCGGA CGTTTCATCG GCGGACCCGA AGTCGAAGCG CTCGAGGCCG AGCTTGCTCC GCTCGCCGAC GCCCGCGCGG TCGTCGGTGT GTCGTCGGGT TCGGACGCGC TGCTGGCCGC GCTCATGGCG CTCGACATCG GCCCCGGTGA TGAGGTCGTG ACCACGCCCT TCACCTTCTT CGCCACCGCG GGTGCCATCG CCCGGCTCGG TGCGCGTCCG GTGTTCGCCG ACATCGATGA GCGCTCGTAC AACCTCGACC CCGCCGCCGC CGCCAGCGCC ATCGGCCCGC GCACCAAGGC GCTGCTGCCC GTGCACCTCT ACGGCCGCCC GGCCGAGCTG CCGGCCATCG ACGGCATGCC GGTGGTCGAA GACGCAGCCC AGAGCTTGAG CGCGTCGCCC GTGCGCGGCA TCTGCCAGTG CGTCAGCTTC TTTCCCACCA AGAACCTGGG CGCGCTCGGC GACGCCGGCG CCGTGCTCAC GCGCGACGAG GAGTTTGCCG CGCGCGTCCG GCTGCTGCGC ACGCACGGCG CACAGCCCAA ATACGTGCAC GCGCTCATCG GCGGCAACTT CCGCATCGAC GCCATGCAGG CCGCCTTGCT GCGGGTCAAG CTGCCGCATC TGGCGCGCTG GAACCAGGAG CGCCGCGCCC GGGCCGCGCG CTACCGCGCG TGCTTCGCGG CCGCCCGCGT GCCCGCCGAG CTGCGCTTGC CCGAGGACGT TTCCGACCAC GTGTACCACC AATTCGTGGT CCGCGCGCCG CGCCGCGACG CGCTGCGCGA CTTTCTGGCC GAGCGGGGCG TGAGCACCGA GGTCTATTAC CCGGTGCCCC TGCATCTGCA GGCCTGCTTC GCCGATCTCG GCTACCGAGC GGGCGCGTTT CCCGTGAGCG AGGCGGCGAG CCGCGAGGCG TTGGCGTTGC CGATTCACCC CGGCCTACCC GGCGACGCAC AGGACTACGT CGTCGAGCAG ATCGCCGCCT TCTATCAATG A
|
Protein sequence | MRVPLVDLGP ETALLREQLT AALARVLDSG RFIGGPEVEA LEAELAPLAD ARAVVGVSSG SDALLAALMA LDIGPGDEVV TTPFTFFATA GAIARLGARP VFADIDERSY NLDPAAAASA IGPRTKALLP VHLYGRPAEL PAIDGMPVVE DAAQSLSASP VRGICQCVSF FPTKNLGALG DAGAVLTRDE EFAARVRLLR THGAQPKYVH ALIGGNFRID AMQAALLRVK LPHLARWNQE RRARAARYRA CFAAARVPAE LRLPEDVSDH VYHQFVVRAP RRDALRDFLA ERGVSTEVYY PVPLHLQACF ADLGYRAGAF PVSEAASREA LALPIHPGLP GDAQDYVVEQ IAAFYQ
|
| |