Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Hoch_6632 |
Symbol | |
ID | 8549049 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Haliangium ochraceum DSM 14365 |
Kingdom | Bacteria |
Replicon accession | NC_013440 |
Strand | + |
Start bp | 9091205 |
End bp | 9091885 |
Gene Length | 681 bp |
Protein Length | 226 aa |
Translation table | 11 |
GC content | 72% |
IMG OID | 646391292 |
Product | transcriptional regulator, TetR family |
Protein accession | YP_003270991 |
Protein GI | 262199782 |
COG category | [K] Transcription |
COG ID | [COG1309] Transcriptional regulator |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 4 |
Plasmid unclonability p-value | 0.000455029 |
Plasmid hitchhiking | No |
Plasmid clonability | decreased coverage |
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Fosmid Coverage information |
Num covering fosmid clones | 2 |
Fosmid unclonability p-value | 0.000000500161 |
Fosmid Hitchhiker | No |
Fosmid clonability | decreased coverage |
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Sequence |
Gene sequence | ATGCTACCCT CGCCTCCCGT GGGCCGACGA AGGAGTGAAC GAGCGCGCAA CAGCGACGCC GACGCGAGCG CGGCGACGCC GAGCACCAGC AGCGGGGACC CGCGCGCGCG ACGCACCCGC GAGCGCCTGC ACGCGGCCCT GCTCGCGCTG CTGCGGGAGC AGCCCTTCGA GTCCATCACG GTGCGCGACC TGAGCGCGCG CGCCGACGTC AACCGCGCGA CCTTCTACCT GCACTACCGC GACAAGGAGG ACCTGGTGAC GCGCGTCTTC CACGACGCGC TCGACGCCCT GGCCCGCCAG GCACCCACGG AGCCGATGTC GCGTGAGAAC GCCGAGCAGG CCCTGGTCGG CTGGTTCGAA CACGCGGCCG CGTACCCGGA CCTGTACCAC CTGGCCATCG GCAGAAACGA CTCCGCCAAT TTCCTCACCC AGGTGCGCGC GCACGTCGAG CGCATCATCG TCCGCGACGC GGGGGCCGCA GACGCGGCGC CAGACCAGGT CCCGGCCCTG ATGTTCGGGC GCTACCTCGC CTCCGCGTGC CTGGGCGTGC TCGGCTGGTG GCTCGAAGAG CGCATGCCGT ATCCGCCGGC GCAGATGGGT CCGTGGCTGC TCACGCTGCT CGAGCGCAGC CACGGTGGCG ATGCCTTCGG CGCGCCCGCG CGGTCTACTT CGAGGAGATG A
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Protein sequence | MLPSPPVGRR RSERARNSDA DASAATPSTS SGDPRARRTR ERLHAALLAL LREQPFESIT VRDLSARADV NRATFYLHYR DKEDLVTRVF HDALDALARQ APTEPMSREN AEQALVGWFE HAAAYPDLYH LAIGRNDSAN FLTQVRAHVE RIIVRDAGAA DAAPDQVPAL MFGRYLASAC LGVLGWWLEE RMPYPPAQMG PWLLTLLERS HGGDAFGAPA RSTSRR
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