Gene Hoch_6632 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagHoch_6632 
Symbol 
ID8549049 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameHaliangium ochraceum DSM 14365 
KingdomBacteria 
Replicon accessionNC_013440 
Strand+ 
Start bp9091205 
End bp9091885 
Gene Length681 bp 
Protein Length226 aa 
Translation table11 
GC content72% 
IMG OID646391292 
Producttranscriptional regulator, TetR family 
Protein accessionYP_003270991 
Protein GI262199782 
COG category[K] Transcription 
COG ID[COG1309] Transcriptional regulator 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones4 
Plasmid unclonability p-value0.000455029 
Plasmid hitchhikingNo 
Plasmid clonabilitydecreased coverage 
 

Fosmid Coverage information

Num covering fosmid clones2 
Fosmid unclonability p-value0.000000500161 
Fosmid HitchhikerNo 
Fosmid clonabilitydecreased coverage 
 

Sequence

Gene sequence
ATGCTACCCT CGCCTCCCGT GGGCCGACGA AGGAGTGAAC GAGCGCGCAA CAGCGACGCC 
GACGCGAGCG CGGCGACGCC GAGCACCAGC AGCGGGGACC CGCGCGCGCG ACGCACCCGC 
GAGCGCCTGC ACGCGGCCCT GCTCGCGCTG CTGCGGGAGC AGCCCTTCGA GTCCATCACG 
GTGCGCGACC TGAGCGCGCG CGCCGACGTC AACCGCGCGA CCTTCTACCT GCACTACCGC 
GACAAGGAGG ACCTGGTGAC GCGCGTCTTC CACGACGCGC TCGACGCCCT GGCCCGCCAG 
GCACCCACGG AGCCGATGTC GCGTGAGAAC GCCGAGCAGG CCCTGGTCGG CTGGTTCGAA 
CACGCGGCCG CGTACCCGGA CCTGTACCAC CTGGCCATCG GCAGAAACGA CTCCGCCAAT 
TTCCTCACCC AGGTGCGCGC GCACGTCGAG CGCATCATCG TCCGCGACGC GGGGGCCGCA 
GACGCGGCGC CAGACCAGGT CCCGGCCCTG ATGTTCGGGC GCTACCTCGC CTCCGCGTGC 
CTGGGCGTGC TCGGCTGGTG GCTCGAAGAG CGCATGCCGT ATCCGCCGGC GCAGATGGGT 
CCGTGGCTGC TCACGCTGCT CGAGCGCAGC CACGGTGGCG ATGCCTTCGG CGCGCCCGCG 
CGGTCTACTT CGAGGAGATG A
 
Protein sequence
MLPSPPVGRR RSERARNSDA DASAATPSTS SGDPRARRTR ERLHAALLAL LREQPFESIT 
VRDLSARADV NRATFYLHYR DKEDLVTRVF HDALDALARQ APTEPMSREN AEQALVGWFE 
HAAAYPDLYH LAIGRNDSAN FLTQVRAHVE RIIVRDAGAA DAAPDQVPAL MFGRYLASAC 
LGVLGWWLEE RMPYPPAQMG PWLLTLLERS HGGDAFGAPA RSTSRR