| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Hoch_6628 |
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| Symbol | |
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| ID | 8549045 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Haliangium ochraceum DSM 14365 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013440 |
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| Strand | + |
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| Start bp | 9087472 |
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| End bp | 9088548 |
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| Gene Length | 1077 bp |
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| Protein Length | 358 aa |
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| Translation table | 11 |
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| GC content | 70% |
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| IMG OID | 646391288 |
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| Product | DNA primase small subunit |
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| Protein accession | YP_003270987 |
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| Protein GI | 262199778 |
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| COG category | [L] Replication, recombination and repair |
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| COG ID | [COG3285] Predicted eukaryotic-type DNA primase |
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| TIGRFAM ID | [TIGR02778] DNA polymerase LigD, polymerase domain |
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Plasmid Coverage information |
| Num covering plasmid clones | 6 |
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| Plasmid unclonability p-value | 0.0103402 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 4 |
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| Fosmid unclonability p-value | 0.0000202322 |
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| Fosmid Hitchhiker | Yes |
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| Fosmid clonability | hitchhiker |
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Sequence |
| Gene sequence | ATGCACTGGC CGCGGCCGCT CGCGGTGCTC TACAGTGCAC CCATGGGCAA ACGAAGCGAG
GCAGTGATGC TGGAGGTCGG CGGTCGCGAG GTGCGGGTGA GCAGCCCGGA CAAGCTCTAC
TTTCCCGCCG CCGGCATCAC CAAGATCGAC CTCGTGCGCT ACTACGCCAC CGTCGCCGAG
CACGCGCTGC GCGGCGTCCG CGACCGGCCC GTGGTGCTCA AGCGCTTCGT CGACGGCATC
TCGGGCAAGC CCTTCTTTCA GAAGCGCGCG CCCGGCAAAC GTCCGAGCTG GGTCGAGTCG
GTCGAGCTCG CCTTTCCCTC GGGCGAGCGC GTCGAGCAGA TCGTCGTCCG CGAGCCCGCG
ACCCTGGTGT GGATGGCGCA GCTCGGCTGC ATCGATCTCA ACCCCCACGC CGTGCGCACC
AGCGATCTCG CCCACCCCGA CGAATTGCGC ATCGACCTCG ACCCCTGCCC TGGCGTGCCC
TGGGACAGCG TCCGCCGGGT CGCGCTCGAG ACCCGCGCCG TGCTCGAGGA GCACGGCCTG
CGCGGCTGGC CCAAGACATC GGGCTCGCGC GGCATGCACG TGTACGCGCG CCTCGAGACG
CGCTGGGACT TTGTCGCGGT GCGTCGCGCG GCCCTGGCGC TGGCCCGCGA GGTCGAGCGC
CGCGCGCCCG GTCTAGCCAG CAGCGAGTGG TGGAAAGAAA AGCGCCAGGG CGTGTTCCTC
GACTTCAACC AGAACCTTCA GGATCGCACC ACCGCGGCCG CGTACTCGGT GCGGCCCGTG
CCCGACGCCC GCGTGTCCAC GCCCCTCACC TGGGAAGAAG TCGCGGTCTG TGAAGCCGAG
GACTTCACCC TGCTCACCGT GCCCCTGCGC CTCGCCGAAC GCGGCGACCT CGGCGCCGGC
ATCGACGACG ACGCCGGCTC GCTCGACAGC CTGCTGAGCC TGGCCGACGA ACAGGCCGCG
GCAGGCTTCG AGGACGCGCC CTGGCCGCCG CACTACAAAA AACAGGCCGG CGAGCCGCCG
CGTGTGGCGC CCTCGCGACG GCGCCGTGAC ACGAACGACA AAACCAACGT TGAATAG
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| Protein sequence | MHWPRPLAVL YSAPMGKRSE AVMLEVGGRE VRVSSPDKLY FPAAGITKID LVRYYATVAE
HALRGVRDRP VVLKRFVDGI SGKPFFQKRA PGKRPSWVES VELAFPSGER VEQIVVREPA
TLVWMAQLGC IDLNPHAVRT SDLAHPDELR IDLDPCPGVP WDSVRRVALE TRAVLEEHGL
RGWPKTSGSR GMHVYARLET RWDFVAVRRA ALALAREVER RAPGLASSEW WKEKRQGVFL
DFNQNLQDRT TAAAYSVRPV PDARVSTPLT WEEVAVCEAE DFTLLTVPLR LAERGDLGAG
IDDDAGSLDS LLSLADEQAA AGFEDAPWPP HYKKQAGEPP RVAPSRRRRD TNDKTNVE
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