Gene Hoch_6623 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagHoch_6623 
Symbol 
ID8549040 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameHaliangium ochraceum DSM 14365 
KingdomBacteria 
Replicon accessionNC_013440 
Strand
Start bp9080040 
End bp9080510 
Gene Length471 bp 
Protein Length156 aa 
Translation table11 
GC content64% 
IMG OID646391283 
Productalkyl hydroperoxide reductase/ Thiol specific antioxidant/ Mal allergen 
Protein accessionYP_003270982 
Protein GI262199773 
COG category[O] Posttranslational modification, protein turnover, chaperones 
COG ID[COG1225] Peroxiredoxin 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones16 
Plasmid unclonability p-value0.987797 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones
Fosmid unclonability p-value0.000700247 
Fosmid HitchhikerYes 
Fosmid clonabilityhitchhiker 
 

Sequence

Gene sequence
ATGCTCAAAG AAGGAAACAA GGCGCCCGCC TTCCGCCTGC CCGCGTCCAC CGGTGAAACC 
GTCAAGCTGT CCGACTACGC CGGCAAGATC GTGGTCCTGT ACTTCTACCC GCGCGATAAC
ACGCCCGGCT GCACCACCGA GGCCAAGGAC TTTCAGGCCG CCTACGGCGA TCTGCGCGAG
CTCGGCGCCG AGGTCCTGGG CGTGAGCAAA GACTCGATCG AGTCGCACTG CAAGTTCGCG
GGTAAGTACG ATCTCGAGTT CCCGCTGCTC TCGGACGCCG ATGGCAAGGT GCTCGAGAAG
TACGAGGCCT GGGGCGAGAA GAACATGTAC GGCCGCAAGT CGATGGGCAT CATCCGCACC
ACCGTGGTCA TCGGCGCCGA CGGCAAGGTC GCCAAGATCT TCCCCAAGGT GCGGGTCAAG
GGCCACGTCG ACAAGGTCGT CGAGCTGGTG CGCGAGCTGG CCGAGGCGTA G
 
Protein sequence
MLKEGNKAPA FRLPASTGET VKLSDYAGKI VVLYFYPRDN TPGCTTEAKD FQAAYGDLRE 
LGAEVLGVSK DSIESHCKFA GKYDLEFPLL SDADGKVLEK YEAWGEKNMY GRKSMGIIRT
TVVIGADGKV AKIFPKVRVK GHVDKVVELV RELAEA