| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Hoch_6620 |
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| Symbol | |
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| ID | 8549037 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Haliangium ochraceum DSM 14365 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013440 |
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| Strand | + |
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| Start bp | 9076135 |
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| End bp | 9077259 |
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| Gene Length | 1125 bp |
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| Protein Length | 374 aa |
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| Translation table | 11 |
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| GC content | 64% |
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| IMG OID | 646391280 |
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| Product | D-xylose transporter subunit XylF |
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| Protein accession | YP_003270979 |
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| Protein GI | 262199770 |
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| COG category | [G] Carbohydrate transport and metabolism |
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| COG ID | [COG4213] ABC-type xylose transport system, periplasmic component |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 16 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 9 |
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| Fosmid unclonability p-value | 0.00486776 |
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| Fosmid Hitchhiker | Yes |
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| Fosmid clonability | hitchhiker |
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Sequence |
| Gene sequence | ATGAAGCGTA TCTCGCGTAC GAAGTCGATA GCCCCCTTGT TCGTTGCCGC ACTCGCCATG
GTCGCGGTAC CCGGATGTAA GAAAGACGAA GAGGCGCCCG CCACGGGTGA AGGCGCCGAG
GCCACCGGCG AAACGCCGGC CGAAGAGGGA CCGCTCAAAG TCGGTTTCCT GCTCAAGACC
ATGCAGGAAG AGCGCTATCA GCGCGACAAG AAGGCCTTCA TCGACAAGGC GCAATCGCTC
GGCGCCGAGG TGCTGTTCGA TTCGGCGAAC AACAACGAGC AAACCCAGCT CTCCAAATTC
GAAACCATGC TCGCGCAGGG TGCCAAGGTG ATCGTGCTGC AGCCGGTCAA CACCGGCACC
GCCGGCAACA TGGTCAAGAT GGCCAATGAG GAGGGCGTCC GCGTGGTCGG CTACGACTCG
ATGCTGGTCA ACGGCCCGCT CGACGTCCAG GTCATGCAGG ATAGCTGGGC CGTCGGCAAG
CTCCAGGGCG AGGCCATGGT CGAGTGGCTC AAGGCCAAGA ACGACGGCAA GGTCGAGGGC
AAGGTCGCCC TGATCAAGGG CCAGCCCGGC GACTCCAACG CCAACGCCAT GTCCGAGGGC
GCGCTGACCA TCATCAACGA GAACGAGGGC CTCGAGCTGG TCGCCGAGGA GTCGCACGAG
GGCTGGTCGT CCGACAAGGC CATGGCCACC GCCGAGAACG TGCTGACCAA GTACGAGAAC
GGCGTCGACG CCTTCATCGC CAACAACAGC GGCATGGCCC GCGGCGTCAT CGCGGCGCTG
CAGAATCAGG GCCTCGACGA CGCCACCAAG GTGTTCGTCG CCGGCTCCGA CGCCGACCTG
GTCAACATCC AGTACGTGGC CCAGGGCAAG CAGGCGGTCG AGATCTGGAA GAAGATCACG
CCGCTGGCCG AGACCGCGGC CGAGATCGCG GTGACCCTGG CCAAGAGCCC CGACAAACCC
GTGACCGAGC TGGTCGAGGC CGATCGCACC ATCAACAACG GCGCGGTCGA GGTGCCCACC
ATCGTCACGC CGGTGGTGCT CGTGACCAAG GATAACGTCG AGGACACCGT GGTCGCCGGC
GAGTTCTACA CCAAAGAGCA GGTCTTCGGC GCCGAGGCCG AGTAA
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| Protein sequence | MKRISRTKSI APLFVAALAM VAVPGCKKDE EAPATGEGAE ATGETPAEEG PLKVGFLLKT
MQEERYQRDK KAFIDKAQSL GAEVLFDSAN NNEQTQLSKF ETMLAQGAKV IVLQPVNTGT
AGNMVKMANE EGVRVVGYDS MLVNGPLDVQ VMQDSWAVGK LQGEAMVEWL KAKNDGKVEG
KVALIKGQPG DSNANAMSEG ALTIINENEG LELVAEESHE GWSSDKAMAT AENVLTKYEN
GVDAFIANNS GMARGVIAAL QNQGLDDATK VFVAGSDADL VNIQYVAQGK QAVEIWKKIT
PLAETAAEIA VTLAKSPDKP VTELVEADRT INNGAVEVPT IVTPVVLVTK DNVEDTVVAG
EFYTKEQVFG AEAE
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