| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Hoch_6617 |
|---|
| Symbol | |
|---|
| ID | 8549034 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Haliangium ochraceum DSM 14365 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_013440 |
|---|
| Strand | + |
|---|
| Start bp | 9073438 |
|---|
| End bp | 9074196 |
|---|
| Gene Length | 759 bp |
|---|
| Protein Length | 252 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 69% |
|---|
| IMG OID | 646391277 |
|---|
| Product | hypothetical protein |
|---|
| Protein accession | YP_003270976 |
|---|
| Protein GI | 262199767 |
|---|
| COG category | |
|---|
| COG ID | |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 18 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 10 |
|---|
| Fosmid unclonability p-value | 0.00981466 |
|---|
| Fosmid Hitchhiker | Yes |
|---|
| Fosmid clonability | hitchhiker |
|---|
| |
Sequence |
| Gene sequence | ATGGCTAAGC CTATCGTGAA GTTTTCCGAA GGAACCCGAG AGGCCGTGGT CTCGCGCGCG
CGCCTCACGC TGTTCCTCAG CGTGATCATC ACCGCCGCGC TGTACGTGGT CCCGTACGGG
CACACGGTCG CGTATCCGCT GCTGCTGATC TCCACGCTGG TCCACGAGCT GGGCCACGGA
CTCGCCGCCA TGCTCGTCGG CGGCAACTTC GAGCGCTTCG TGATGTTCGC CGACGGCTCG
GGCCAAGCCC TCTCGAGCGG CGCCTTCAAC GGCCTCGAGC ACGCCTTCAT CGCCGCCGGT
GGCCTCATCG GCCCGGCCGT GGGTGCGGCC TTCTGCCTGA TCTTCGCGCG CCGCACCAGC
ACCGCCCGCT ACTGCATGGG CACCATCGGC GTGCTGATGC TCATCGCCGA GGTGGCCGTG
GTGCGCAACC CCTTCGGGCT GGCCTTCGTC GGCATCTTCG CCGCGCTGTG CCTGCTCTTC
GCCTTCAAAG CCGGGCCGCA GCTCGTGCAG CTCGCGCTGG TGTTTCTGGG TGTGCAGCTC
GCGCTCAGCG TGTACTCGCG CAGCGATTAT CTGTTCACAC CCACGGCACA GACCGCGGTC
GGCGCCTCGC CCTCGGACGC TCAGGCCATC GCCGACGCCA TGGGCTTCGC CCCGTACTGG
TTCTGGGGCG GACTGTGCGG CGCCTTCTCG GTCGTCGTGC TCATCGTCGG CGGCTGGCTG
TTCCTCCGCG GCGCGCGCAA GAACGCCGGC GCGGCCTGA
|
|---|
| Protein sequence | MAKPIVKFSE GTREAVVSRA RLTLFLSVII TAALYVVPYG HTVAYPLLLI STLVHELGHG
LAAMLVGGNF ERFVMFADGS GQALSSGAFN GLEHAFIAAG GLIGPAVGAA FCLIFARRTS
TARYCMGTIG VLMLIAEVAV VRNPFGLAFV GIFAALCLLF AFKAGPQLVQ LALVFLGVQL
ALSVYSRSDY LFTPTAQTAV GASPSDAQAI ADAMGFAPYW FWGGLCGAFS VVVLIVGGWL
FLRGARKNAG AA
|
|---|
| |