| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Hoch_6615 |
|---|
| Symbol | |
|---|
| ID | 8549032 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Haliangium ochraceum DSM 14365 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_013440 |
|---|
| Strand | - |
|---|
| Start bp | 9070434 |
|---|
| End bp | 9071396 |
|---|
| Gene Length | 963 bp |
|---|
| Protein Length | 320 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 68% |
|---|
| IMG OID | 646391275 |
|---|
| Product | NAD-dependent epimerase/dehydratase |
|---|
| Protein accession | YP_003270974 |
|---|
| Protein GI | 262199765 |
|---|
| COG category | [G] Carbohydrate transport and metabolism
[M] Cell wall/membrane/envelope biogenesis |
|---|
| COG ID | [COG0451] Nucleoside-diphosphate-sugar epimerases |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 16 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 12 |
|---|
| Fosmid unclonability p-value | 0.04011 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGAAGTTTC TCATTACAGG TGCGGGCGGA CAGATCGGCC GTGAATTGGT AGCCGCGTTC
GCGGCCGAAG GGCACGAACT CATCGCCGCG GATCTGCGCC CTTTCGAGCA GCGCGGAGTG
GCCGGCGAGC GCTGGGTTGC GCTCGATGTG CGCGATCGCG AACAGGTCTT CGAGCTGCTC
GCGCGCGAGC GTCCCGGCGC GATCTTTCAC CTGGCCGCGG TGCTCAGCGC GCGCGGTGAG
AGCGATCCGC AGCTCACCTA CGACGTCAAC CAGACCGGCA CCTACAACCT GCTCGAGGGT
GCGCGCATCC ACGGGGTATC GCGCTTCATC TTTCCCAGCA CCATCGCCGT GTACGGGCCC
GGATTGCCCG ATCCCACACC CGACGACGTG CCGCTGCACC CGACGACGAT GTACGGGGTG
ACCAAGGTCG CCGGCGAGCT CTTGTGCGAG TACTACCGGC GCCGCTATGA GATGGACATC
CGCGGGCTGC GCTTTCCCGG GCTGATCAGC GCGTCGCTGC CCGGCGGCGG CTCCAGCGAC
TACGCGCTGT TCATGTACGT CGACGGCGTG CGCCGCGGCC GCTACGAGGC CTTTTGCCGG
CCCGACACCC GCATCCCGCT GATGTACATG GACGATGCCC TGCGCGCGCT GCGCGAGCTC
TTCGACGCGC CGCGTGAACG CCTGCGCCGA TGCGTCTACA ACATCGCCGC CTTCAGCCCC
AGAGCCGACG AGGTCGCTGC CTCGGTGGCG CGCGCGCTGG GCGATGTGCA CTTCAGCTTC
GCGCCCAACC CGGTCAAGCA GGGGATTCTC GACTCGTGGC CGAGCGCGCT CGACGACGCC
TGTGCCCGCG CAGATTGGGA CTGGCGTCCG AGATTCGATC TCGACCAGAT GACCGAAGAC
CTCATCCCCA AGATTCGGGC GCTGCTCGCC GAGCGAGCGG ACGCCCTTGA CCACGGCGCC
TAG
|
|---|
| Protein sequence | MKFLITGAGG QIGRELVAAF AAEGHELIAA DLRPFEQRGV AGERWVALDV RDREQVFELL
ARERPGAIFH LAAVLSARGE SDPQLTYDVN QTGTYNLLEG ARIHGVSRFI FPSTIAVYGP
GLPDPTPDDV PLHPTTMYGV TKVAGELLCE YYRRRYEMDI RGLRFPGLIS ASLPGGGSSD
YALFMYVDGV RRGRYEAFCR PDTRIPLMYM DDALRALREL FDAPRERLRR CVYNIAAFSP
RADEVAASVA RALGDVHFSF APNPVKQGIL DSWPSALDDA CARADWDWRP RFDLDQMTED
LIPKIRALLA ERADALDHGA
|
|---|
| |