Gene Hoch_6609 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagHoch_6609 
Symbol 
ID8549026 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameHaliangium ochraceum DSM 14365 
KingdomBacteria 
Replicon accessionNC_013440 
Strand
Start bp9062722 
End bp9063495 
Gene Length774 bp 
Protein Length257 aa 
Translation table11 
GC content72% 
IMG OID646391269 
Productimidazoleglycerol phosphate synthase, cyclase subunit 
Protein accessionYP_003270968 
Protein GI262199759 
COG category[E] Amino acid transport and metabolism 
COG ID[COG0107] Imidazoleglycerol-phosphate synthase 
TIGRFAM ID[TIGR00735] imidazoleglycerol phosphate synthase, cyclase subunit 


Plasmid Coverage information

Num covering plasmid clones13 
Plasmid unclonability p-value0.563692 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones14 
Fosmid unclonability p-value0.105862 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCTGACCA AGCGCATCAT TCCCTGTCTC GATGTCAAAG ACGGCCGGGT GGTCAAGGGC 
ATCAACTTCG TCGAGCTGCG CGACGCCGGC GACCCCGTCG AGCAGGCGGC CGCCTACGAC
GCCCAGGGCG CCGACGAGAT CTGCTTCCTC GACATCTCGG CCTCGCCCGA GGGCAAATCG
ACCATGCTCG ACGTGGTCGC GCACACGGCC GAGCGCGTGT TCGTGCCGCT CACGGTCGGC
GGCGGCGTGC GCAGCGTGGA CGACGCCCGC CGGCTGCTGC GCGCGGGCGC CGACAAGGTC
GCCATCAACA CCGCCGCCAT CCGCAATCCC GAGCTGATAC GCGCGGCCTC CGAGCATTTT
GGCGCCCAGG CCATCGTCGT CGCCGTCGAC GCCAAGGTCC GCCCCGACGG CAGCTTCGAG
GTCTACAGCC ACGGCGGCCG CACCGCCGAG GGCCTCGACG CGGTGGCCTG GTGCGAGCGC
GTGGTCGCGC TCGGCGCCGG CGAGATCCTG CTCACCAGCA TGGACCGCGA CGGCACCCGC
GCCGGCTACG ATCTCGCGCT GACCCGGCGC GTGAGCGAGG CCGTGGATGT GCCCGTCATC
GCCTCGGGCG GCGTCGGCAC GCTCGAGCAC CTGGCCGAGG GCTTCACCGA GGGCGGCGCC
GACGCGGTCC TGGCCGCGTC GATCTTCCAC TACGGCGAGC ACACCATCGC CGAGGCCAAG
CGCTACCTGC TCGCCCGCGG CATCGCCATG CGCCCGCCCG AGGACGACGC GTAG
 
Protein sequence
MLTKRIIPCL DVKDGRVVKG INFVELRDAG DPVEQAAAYD AQGADEICFL DISASPEGKS 
TMLDVVAHTA ERVFVPLTVG GGVRSVDDAR RLLRAGADKV AINTAAIRNP ELIRAASEHF
GAQAIVVAVD AKVRPDGSFE VYSHGGRTAE GLDAVAWCER VVALGAGEIL LTSMDRDGTR
AGYDLALTRR VSEAVDVPVI ASGGVGTLEH LAEGFTEGGA DAVLAASIFH YGEHTIAEAK
RYLLARGIAM RPPEDDA