| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Hoch_6604 |
|---|
| Symbol | |
|---|
| ID | 8549021 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Haliangium ochraceum DSM 14365 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_013440 |
|---|
| Strand | + |
|---|
| Start bp | 9058351 |
|---|
| End bp | 9058731 |
|---|
| Gene Length | 381 bp |
|---|
| Protein Length | 126 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 73% |
|---|
| IMG OID | 646391264 |
|---|
| Product | transcriptional regulator, XRE family |
|---|
| Protein accession | YP_003270963 |
|---|
| Protein GI | 262199754 |
|---|
| COG category | |
|---|
| COG ID | |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 15 |
|---|
| Plasmid unclonability p-value | 0.608837 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 16 |
|---|
| Fosmid unclonability p-value | 0.251603 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGGCGCACG ATCCCGATGA GGCCCTGCGG CGCAGCTTCG CCCGCAACGT GCGCAAAGCG
CGCGTGCGCC GCCAGCTCAC TCAGGAAGAC GTCGCCGAGG CCCTGGACGT GAGCCCCACG
GTCTATCGAC GCTACGAGCG CGCCCAGATC TGGCCGGTGC TCGAGCGCTT CACGCGCCTG
TGCGAGGTGC TGTCGTGCTC GGCCGACGAG CTGTTCGGCT TCCGCGAGCT CGATACCCGC
CGCCGGCCGC GCGCGCGCGA CGACGACTCG CCCGCGCTGC GCCGGCTCAA CCGCCAGCTC
CGCACCGCCT CGCCGGCGGC CTGTCGCCTG GCCTGCGAGG TCCTCGACCT GCTGCGGCCG
CTGCATCGGC ACGAGCGCTG A
|
|---|
| Protein sequence | MAHDPDEALR RSFARNVRKA RVRRQLTQED VAEALDVSPT VYRRYERAQI WPVLERFTRL
CEVLSCSADE LFGFRELDTR RRPRARDDDS PALRRLNRQL RTASPAACRL ACEVLDLLRP
LHRHER
|
|---|
| |