Gene Hoch_6594 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagHoch_6594 
Symbol 
ID8549011 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameHaliangium ochraceum DSM 14365 
KingdomBacteria 
Replicon accessionNC_013440 
Strand
Start bp9046795 
End bp9047664 
Gene Length870 bp 
Protein Length289 aa 
Translation table11 
GC content70% 
IMG OID646391254 
Producthypothetical protein 
Protein accessionYP_003270953 
Protein GI262199744 
COG category[S] Function unknown 
COG ID[COG2426] Predicted membrane protein 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones22 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones24 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGATGCTGC GCAATCCCTT CGACGCCTCG TGGCGCGAGC GCATCGCCGT GCTCGGTACC 
GCGGCCGCGA TCCTGCTCAT CGCCACGGCC CTCGGCCTGA TCTACGCGCG CGGCGCCAGC
CTCGAACTGC TCGGCCTGGT GCCGGTCTCG GCCTTTGCCG TGGGTAAGTT CCTGCCGCTG
TGGGGCCTGT CCGACCGCAG CCAGTTTTCG CCCTGGGAAC TCGGCTTGCT GGTCTGGGTG
ATGGACACGC TCACGGTTTT GGTCCTGGTG TACGGATTCG AGCTGCTGTA CCGCATTCGT
CTGATCAAGA ACGCGCTCGG CAAGATCCAG CGCAACGCCG GGCTGGTGCT GCGCGCCTAC
CCGCGCATCC GCCGCGCCGC GGTCACCGGC GTGGTGCTGT TCGTGCTCTT TCCCATCGCG
GGCACCGGCG CCATCGGCGG CGCCTTCCTC GGCATCCTGC TCGGTCTCAA CCGCTTCGTG
CTCATCGCCG CGGTCAGCGG CGGCGGCTTC ATCGGCGGCA TGCTCATGGC ATTCGCCGCC
GTGTACTTCG GCGAAGCGGT GCAGAACCTG CGCGCCTTGC AGAGCGACCC CACGGTCAAG
TGGGCGGTGA TGATCACCCT GGGCGCGCTG CTGATCGCCG GGTTCTGGTG GCTCAATCGC
GCCTACAAGC GCGCGCTGCT CGCCGCCGAG GAACAGAGCG TCCACGACGA GTACGACGAC
GCCGATGTGC ACGAGGCGGC ATCCGGCGCG AGCGCGCCGG ACCCGGACGA CCCGGACAAT
CGCCCCGAGG CCGCGGCAGA GAACGACGCT CGCGCGCCCG TGAGCGGCGG CTCGGGCGCC
GCCGACGCGT CCCGGGCGCC CTTGGCCTAG
 
Protein sequence
MMLRNPFDAS WRERIAVLGT AAAILLIATA LGLIYARGAS LELLGLVPVS AFAVGKFLPL 
WGLSDRSQFS PWELGLLVWV MDTLTVLVLV YGFELLYRIR LIKNALGKIQ RNAGLVLRAY
PRIRRAAVTG VVLFVLFPIA GTGAIGGAFL GILLGLNRFV LIAAVSGGGF IGGMLMAFAA
VYFGEAVQNL RALQSDPTVK WAVMITLGAL LIAGFWWLNR AYKRALLAAE EQSVHDEYDD
ADVHEAASGA SAPDPDDPDN RPEAAAENDA RAPVSGGSGA ADASRAPLA