| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Hoch_6593 |
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| Symbol | |
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| ID | 8549010 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Haliangium ochraceum DSM 14365 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013440 |
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| Strand | + |
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| Start bp | 9044042 |
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| End bp | 9046762 |
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| Gene Length | 2721 bp |
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| Protein Length | 906 aa |
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| Translation table | 11 |
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| GC content | 69% |
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| IMG OID | 646391253 |
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| Product | PAS/PAC sensor hybrid histidine kinase |
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| Protein accession | YP_003270952 |
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| Protein GI | 262199743 |
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| COG category | [T] Signal transduction mechanisms |
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| COG ID | [COG5002] Signal transduction histidine kinase |
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| TIGRFAM ID | [TIGR00229] PAS domain S-box |
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Plasmid Coverage information |
| Num covering plasmid clones | 21 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 23 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | TTGATCCGGC GGCATGACAA CGAACGGCCT CCGCCTCACA ACGAGACGGT CGATGCGGCC
GAGATCCACG CTCAACAGCG CCTGGCGCTG CGGGAGATGG GCGGGGGCAG CTTTGCGCAC
GAGCCGAGCA CCCAGGTGGT GCGCTTCGAT CCCGGCTGCG CGCGCTGCAT CGGCTACGAA
CCCCTCGACC TGCCGAGCTC GAAGCGCCCC CTGCTGTGGC TGTACCGGCG CGTCGTACAT
CCGGAGCAGC GCGAGTCGGC GGCCCGCGCC TACCGCGATT TCCTCGCCCA TCCGGATACC
GGCTTCTCGC TGGCGCTGCG CCTGCGCCAT GCTGCCGGGC ACTGGGCGCT GGTGCGCATC
TCGGCCGAGG CCGTAGCCCG CGACGACAGC GGCCGCGCGC TGCGCGTAGC CGGGATCTGT
CGCCCGCTCG ATGACTCCGA GCCAGCGTCC CGCAGCGAAC ACGAGGCCAT CGCGCGGATG
CCGTCCCCAC CCCCGACCGA CGCCGTGGCC GCGGTCTACG AAGCCCTGCC CATGGGTATC
GCCCTGTTCG ATCGCGGCGG GCGCGTGCTG CACTGCAATC CCTCATTCGC CGGTCTCCTC
GGCTATCCGC TGGCGCGCGT CACGGACCGC AAGGTGGCCG AGTTGGTGCC GAGCCGGGGC
GACCGCCTCA TCCACTGCAT CGCGCGCGTG CTCGACACCG GCGCCGCGCT GGAGGAGAAG
CTGGGCGAGG TAGACGTCGC GCCCGCGGGC GAGCGAGTGT GGAACTGCCA CTTCGTGCCG
GTCACCCTGA GCGACCGACG GGCCGCCGTA TGCGGCGCCT TCCACGACGT CACCGAGCAC
CAGCGCGCCA TCGTCCAGAC CCAGATCAGC GAGGAGCGCT TCCGCGGCAC CTTCGACAAC
GCCGCCGTCG GCATCGCCCA CGTCGGCTTC GACGGCCGCT GGCTGCGCTT CAACGATCGC
CTGTGCACGC TCACCGGCTA CCCGCGCGAC GAGCTGCGCG AGCTCACCTT CCAGGACATC
ACCCATCCGG AGGACCTCGA CAGCGATCTC GCCTGCTACC AGGACCTCAT CGCCGGACGC
ATCGAGCACT ACAGCATGGA GAAGCGCTAC CTCCGGCGCG ATGGTACCTG CATCTGGATC
CAGCTCACCG TATCGCTGGG ACGCGTCGAC GGCGAGGCCA GCTACGGCAT CTCCATCATC
GAGGACATCA CGCACCGCAA GCGCATCGAG GAGCGCCTGC GGGTGAGCGA GGAGTACATC
CGCGCGGTCG TCGAACAGGC GTCCGAAGCC ATCGTCGTGG CCGCGCCAGA GGGTGATTTC
ATCGAGGTGA ATTCGGCCAT GTGCGCGCTC TTTGGCTACT CGCGCGAGGA GCTGCTCGGG
CGCCGCATCC TCGAGTTCAC GGCCGATGAG GACAAAGAGC GCGTGTCGGA AGCCAGCTCC
TGGCTGCGGC AGCAGGCCGG CCGGGTGTTG CTCGACGAGT GGACGATCGA GCGCAAGGAT
GGCACTCGCG TGCCCATCGA GGTCAGCGCC AAGCTGCTCT CAGACGGTCG CGGCGCCGCC
TTCATCCGCG ACGTGAGCGA GCGCAAAAAA GCCGAGAACG CGCTGCGCGT GGCCGGGCGG
CAGAAGGACA TATACATGGC CATGCTCGGC CACGAGCTGC GCAATCCGCT GTCGTCGATC
CGGGCCGCGG TCGAGCTGCT CGAGCTCGGC CCCACCAGCG ACGTGGATCT GCAGCGCATC
CACAAGAGCC TGATGCGCCA GACCTCGCAC ATGGCCAAGC TGGTCGACGG TCTGCTCGAC
GTCTCCCGCC TCGAGCTCGG CCGCATCACG CTCGAGCGCC AGGTGCTCGA TATCCGCGGG
CTGGTGAGCG ATGTCCTCCA GGACTACCTG GTGTCCATCA AGGAGCGCGG CCAGACCCTG
CACAGCTCGA TCGCGACCGA GGCGTTGCCG GTGTCGTGCG ACCCGGCGCG CCTGAGTCAG
ATCCTCGACA ACCTGCTGGC CAACGCCATG CAGTTCACGC CCCGGGACGG CATCATCACC
GTCAACCTGC AGCGCGGCAA AGGCGAAGCC GTGCTGACGA TCCGCGACAC CGGCGCCGGC
ATCGCGCCCG ACCTGTTGCC GCACATCTTC GAACCCTTCT GCCAGGCGAC GCAGTCGATC
GACCGCACCG CCGGCGGCCT CGGCCTCGGC CTGGCGCTGG TCAAGACCCT GGTCGAGCTG
CACGATGGCC GCGTTGTCGC CAGAAGCCCC GGGCTCGGCG CGGGCGCCAG CTTCGAGATC
ACTCTGCCGC TGAGCGAGGA GGCCACACCG GCCAGCCGCG TGGCCGCGTC CTCCGATGCC
CGGGTGCGCA TCCTGGTCGT GGACGACAAC CGCGACACCG CCGACATGCT GCGCGAGGCG
CTCGAGACTG TCGGCCACCA GGCGCGCACA GCCTACGACG GGATGCAGGG CTTGAACCTG
GCCCGCGACT TCCATCCCGA GGTCATTCTC TGCGATATCG GCTTGCCCGG CGGCATGAGC
GGCTACGACG TGGCCCGCGC CATCCGCGAG GACAAGCACC TCAAGGGCGT GTATCTGATC
GCGCTGACCG GCTACGGCAC CAAGGCCGAC CGCGCCGCCG CGCTCACGGC CGGCTTCGAC
GAGCACCTGG CCAAGCCCGC CGGGCTCAAG GAGATCGCCC GGCTGCTCCA GCGCGCCAGC
ACGCGCACGG CCAACGCCTG A
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| Protein sequence | MIRRHDNERP PPHNETVDAA EIHAQQRLAL REMGGGSFAH EPSTQVVRFD PGCARCIGYE
PLDLPSSKRP LLWLYRRVVH PEQRESAARA YRDFLAHPDT GFSLALRLRH AAGHWALVRI
SAEAVARDDS GRALRVAGIC RPLDDSEPAS RSEHEAIARM PSPPPTDAVA AVYEALPMGI
ALFDRGGRVL HCNPSFAGLL GYPLARVTDR KVAELVPSRG DRLIHCIARV LDTGAALEEK
LGEVDVAPAG ERVWNCHFVP VTLSDRRAAV CGAFHDVTEH QRAIVQTQIS EERFRGTFDN
AAVGIAHVGF DGRWLRFNDR LCTLTGYPRD ELRELTFQDI THPEDLDSDL ACYQDLIAGR
IEHYSMEKRY LRRDGTCIWI QLTVSLGRVD GEASYGISII EDITHRKRIE ERLRVSEEYI
RAVVEQASEA IVVAAPEGDF IEVNSAMCAL FGYSREELLG RRILEFTADE DKERVSEASS
WLRQQAGRVL LDEWTIERKD GTRVPIEVSA KLLSDGRGAA FIRDVSERKK AENALRVAGR
QKDIYMAMLG HELRNPLSSI RAAVELLELG PTSDVDLQRI HKSLMRQTSH MAKLVDGLLD
VSRLELGRIT LERQVLDIRG LVSDVLQDYL VSIKERGQTL HSSIATEALP VSCDPARLSQ
ILDNLLANAM QFTPRDGIIT VNLQRGKGEA VLTIRDTGAG IAPDLLPHIF EPFCQATQSI
DRTAGGLGLG LALVKTLVEL HDGRVVARSP GLGAGASFEI TLPLSEEATP ASRVAASSDA
RVRILVVDDN RDTADMLREA LETVGHQART AYDGMQGLNL ARDFHPEVIL CDIGLPGGMS
GYDVARAIRE DKHLKGVYLI ALTGYGTKAD RAAALTAGFD EHLAKPAGLK EIARLLQRAS
TRTANA
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