Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Hoch_6586 |
Symbol | |
ID | 8549003 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Haliangium ochraceum DSM 14365 |
Kingdom | Bacteria |
Replicon accession | NC_013440 |
Strand | + |
Start bp | 9035310 |
End bp | 9037502 |
Gene Length | 2193 bp |
Protein Length | 730 aa |
Translation table | 11 |
GC content | 68% |
IMG OID | 646391246 |
Product | transglutaminase domain protein |
Protein accession | YP_003270945 |
Protein GI | 262199736 |
COG category | [E] Amino acid transport and metabolism |
COG ID | [COG1305] Transglutaminase-like enzymes, putative cysteine proteases |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 9 |
Plasmid unclonability p-value | 0.615613 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 18 |
Fosmid unclonability p-value | 0.702317 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGCGCTTCA TCACCGCCCA CAAGCTCACC TCGTATCTGA TGGTCCTGTG CGCGTTCTGC GCGCTCGGGT TGTCGGGCTC GCTCAATCCC TTCGTCACCG CCACGGCCTT TGTCATCTCC TGCGGCTCGT GGTTCTGGGA GGCGCCGCGC GTCGACGCCA AGCGATTCGC GTCCATCTGG GCGATCATGT CGCTGTTCGT GCTCGGCTTG ACCGTGCTGC GCGCGGTCAT GGGCGGCGAG TTCCTCATCG TCGGCGTCGA GTACCTGCTG TTCCTGCTCA TCGCCAAGCT GTTCAACCGC AGCGCCTGCC GCGACTACCT GCACATCTAC GTGCTCACCT TCCTCATGCT GGTCGCGGGC ACGGTGCTCA ACCCCGAGCT CACCTACGGC GTCTTCTTCC TCGGCTACGT CATCGCCACC ACCTGGGCGC TGATCCTGTT TCACCTGCGC CGCGAGATGG AGGAGAACTT CCTCTTGCGC CACGCCGCCG ACCGCGACTC CGAGCCGGTC CAGGTCACGC GCATCCTCAA CTCGCGGCGC ATCGTCGGCC GGCGCTTCTT CGTCGGCACC GCGCTGATGT CGGTGGCCGT GTTCGCGCTG GCCTCGATCA TGTTCCTCGC CATTCCGCGC ATCGGCTTCG GCCTGTTCTC GCAAAAGCGC CAGTCCGGCA TCAACATGAC CGGCTTCTCC GACCGCGTCA GCCTCGGCGG CCACGGCACC ATCAAGACCG ACAACACCGT GGTCATGCGG GTCAAGACCG AGCCGCTGGT CCACCCCTTC GAGCCGCGCG CCGTGTACTG GCGCGGCGTC GCCTTCGACA CCTACCAAGA GGGCCGCTGG CTGCGCCGCC CCGACGCACC GCGCACCAAC TGGCAGGTCA CGCACGAGGG CGGCAACCGC AACCGCTACT ACATGCTCTA CGATCGCTCG AGCGCTTCGC CGAGCGAGCT GGGCCAGCTC CTCGAGGACA CCGTGCGGCA GGAGATCTAC CTCGAACCCA TCAGCGAGGA GGTGCTCTTC GGCGCGTCGA TGCCGCGCAG CTTCGACATC GAGGTGCGCC CCGGCGTGCA CCGCGGCAAA CCCTGGCGCA CGCGCAACGA CGAGATGCGC TACCCGCACA ACAGCGGCAT CAAGTACGAA GTGCACTCGC AGATCGCGCC GCCCGCCGCG GCCGCGCTGC GCGCCTCCCC CGAGGCCCTG CCGCCCGGCT TTCAGCACTA CCTGCAGCTC CCGGACGAGA TCCCCGAGCG CGTGATCGAG CTCGCGCGCG ACATCACGCG CGACGCCGAG ACCCGCTACG ACAAAGCCAT GGCCATCGAG GACTGGCTCG AGAGCAACCT CTCGTACACG CTCGAGATGC GCTCGCCGGG CGACATGGAG CCGATCGACT TTTTCCTCTT CGAACGCCGG ATGGGCCACT GCGAGTACTT CTCCTCGGCC ATGGCCGTGC TCATGCGCGC GGCCGGCGAG CCGGCGCGCA ACGTCAACGG CTTCCTCGGC GGCGAGTGGA ACGAATACGA CAAGTACATC GCCGTGCGCG CCGGCGACGC CCACTCGTGG GTCGAGGTGT ACTTCGCCGA GGTCGGCTGG GTGACCTTCG ATCCCACGCC GCCGAGCAGC ACGAGCGCCG CGCTCGGACA GATGGACGAT TTCTCCGACC GTCTGCGGCG CATGTTCGAC ACCGTGCGCT TCCAGTGGTT CCAGTGGGTC ATCGACTACG ATCTCTACCG CCAGGTCAGC CTGTTCAAGA ACGTGAGCGG CGCGGTCCGC GACAGCTCGT CCTCGGCCGG CAATGTCTTC GCCGACCTGC GCACCTGGGT GGTGGCGCGC GGCCCGCTGC TCGGCGGCAT CCTCGGCGGC GGCGCGTTTG CCTTCCTGCT GCTGTCCTGG TGGCGGCGAC GCGCGCCGGG CACCAACGCG CGCCGCAGCA GCGACCCGCT GGCCGGTATC TACCAGCGGG TCGAGACCTC GCTGGCCCGC GCCGGCCACG GGCGCGCGCC CGCGAGCACG CCACGCGAAC ACGCCAGCGC GCTGCGCGAC AGCGCCGTGC CCGGTGCCGC GCCGCTGGAG CAGCTCACCG AGCTGTACTA CCGGCGCTGC TACGGCGGTG ACCACGCCCC CGACGACATC GCGCGAGCAC AGGCACTCGC CGACGAGATC GAGCGCGCGC TGCGCGACAG CAAGCGTTCG TAG
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Protein sequence | MRFITAHKLT SYLMVLCAFC ALGLSGSLNP FVTATAFVIS CGSWFWEAPR VDAKRFASIW AIMSLFVLGL TVLRAVMGGE FLIVGVEYLL FLLIAKLFNR SACRDYLHIY VLTFLMLVAG TVLNPELTYG VFFLGYVIAT TWALILFHLR REMEENFLLR HAADRDSEPV QVTRILNSRR IVGRRFFVGT ALMSVAVFAL ASIMFLAIPR IGFGLFSQKR QSGINMTGFS DRVSLGGHGT IKTDNTVVMR VKTEPLVHPF EPRAVYWRGV AFDTYQEGRW LRRPDAPRTN WQVTHEGGNR NRYYMLYDRS SASPSELGQL LEDTVRQEIY LEPISEEVLF GASMPRSFDI EVRPGVHRGK PWRTRNDEMR YPHNSGIKYE VHSQIAPPAA AALRASPEAL PPGFQHYLQL PDEIPERVIE LARDITRDAE TRYDKAMAIE DWLESNLSYT LEMRSPGDME PIDFFLFERR MGHCEYFSSA MAVLMRAAGE PARNVNGFLG GEWNEYDKYI AVRAGDAHSW VEVYFAEVGW VTFDPTPPSS TSAALGQMDD FSDRLRRMFD TVRFQWFQWV IDYDLYRQVS LFKNVSGAVR DSSSSAGNVF ADLRTWVVAR GPLLGGILGG GAFAFLLLSW WRRRAPGTNA RRSSDPLAGI YQRVETSLAR AGHGRAPAST PREHASALRD SAVPGAAPLE QLTELYYRRC YGGDHAPDDI ARAQALADEI ERALRDSKRS
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