Gene Hoch_6585 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagHoch_6585 
Symbol 
ID8549002 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameHaliangium ochraceum DSM 14365 
KingdomBacteria 
Replicon accessionNC_013440 
Strand
Start bp9034155 
End bp9035297 
Gene Length1143 bp 
Protein Length380 aa 
Translation table11 
GC content70% 
IMG OID646391245 
Productprotein of unknown function DUF58 
Protein accessionYP_003270944 
Protein GI262199735 
COG category[R] General function prediction only 
COG ID[COG1721] Uncharacterized conserved protein (some members contain a von Willebrand factor type A (vWA) domain) 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones18 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones17 
Fosmid unclonability p-value0.433364 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCTCAACC TGTCCCGCAT TCGCGCACGC CTGCGGCCAC CGCGCCGGCT CAAGTTCACG 
CGCGAGGGCC GCTACTACGT GGCCATCAGC GTCGGTATCG GGCTCGCCGC GATCAACACC
GGCAACAACC TGCTGTATCT GCTGCTCGGC TGGCTGCTGT CGGTGATCAT CGCCTCGGGC
CTGCTCAGCG AGCAGGTGCT GCGCGGGCTG CGCATCCAGC GCCGACCGCC GCCGCGGGTG
TTCGCCGAGC AGGCCTTTCT CATGGAGATC TCGGTCGAGA ACACCAAGAA GTCGCTGGCC
AGCTATTCCA TCGAGGTCGA GGATCAGGTC TCGGTCGGGC CGCTCGACAA GAAGTGCTAC
TTCCTCAAAG TGCCCGCCGG CCGCACCCAG CGCACCTCGT ACCGGCACAC CTTCGCCCGC
CGCGGCCTGT ATCGCTTCGC GGGCTTTCGC GTCGGCACCA AGTTCCCCTT CGCCCTGTTC
CGCAAATCGC GCGACATCGA CGTCGGCTGC GACCTGGTCG TGTTCCCCAA GATCCAGCCG
GTCGCGGTGC CGGCGCCGCG CACGCACTTC GCCGGCCACG ACACCGCCCG CCAGATGGGC
CGCCGCGGCG AGTTCTTCGG ACTGCGCGAG TACCGCGACG GCGACGAGCG CCGCGACATC
CACTGGCGCT CGAGCGCGCG CACCGGCCGC GCCCTGGTGC GCGAGTACGA GGCCGAGTCG
CAGAAGCGGG TCACCGTGCT GCTCGACAAC GCGCTGCCGG ATGACGCCGT CGCCCCGCCG
CCCAAAAAAC CGGCGCGTAC GCTCGGCAAA AAGGCGGACG CCAAGGGCGA CGCTGCCGCG
AGCGAGCTCG CCGAGGCCAT GGAGCGCACC GTGAGCGCGG CCGCCTCGCT GGCCACCGCG
TACCTCAACA AGGGGTATTC GGTACAGCTC GTGGCGCGCG GCTGTCGGGT GCCGTTTTCG
TCCGGGCCGC AGCAGCTCAC GCGCATCCTC AACGCCCTGG CCCTGCTCGA GACCGTGAGC
GACGAGGTGC CGCTGACGAC CAACCTCGAC CCGCGCATCG AGAGCGTGCT GTTTCACCCG
CGGGCCGCGG CCGGCGTCCG CAACCGGCCG AGCAACGCCG CCCACGTCTA CCCCATCGAT
TGA
 
Protein sequence
MLNLSRIRAR LRPPRRLKFT REGRYYVAIS VGIGLAAINT GNNLLYLLLG WLLSVIIASG 
LLSEQVLRGL RIQRRPPPRV FAEQAFLMEI SVENTKKSLA SYSIEVEDQV SVGPLDKKCY
FLKVPAGRTQ RTSYRHTFAR RGLYRFAGFR VGTKFPFALF RKSRDIDVGC DLVVFPKIQP
VAVPAPRTHF AGHDTARQMG RRGEFFGLRE YRDGDERRDI HWRSSARTGR ALVREYEAES
QKRVTVLLDN ALPDDAVAPP PKKPARTLGK KADAKGDAAA SELAEAMERT VSAAASLATA
YLNKGYSVQL VARGCRVPFS SGPQQLTRIL NALALLETVS DEVPLTTNLD PRIESVLFHP
RAAAGVRNRP SNAAHVYPID