| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Hoch_6564 |
|---|
| Symbol | |
|---|
| ID | 8548981 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Haliangium ochraceum DSM 14365 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_013440 |
|---|
| Strand | - |
|---|
| Start bp | 9009388 |
|---|
| End bp | 9011268 |
|---|
| Gene Length | 1881 bp |
|---|
| Protein Length | 626 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 69% |
|---|
| IMG OID | 646391226 |
|---|
| Product | serine/threonine protein kinase |
|---|
| Protein accession | YP_003270925 |
|---|
| Protein GI | 262199716 |
|---|
| COG category | [K] Transcription
[L] Replication, recombination and repair
[R] General function prediction only
[T] Signal transduction mechanisms |
|---|
| COG ID | [COG0515] Serine/threonine protein kinase |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 21 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 13 |
|---|
| Fosmid unclonability p-value | 0.0993188 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGTCGCATC CACGGGGCCA GTCGTCATCG CGTGCGCGCC TGCATCGAGG GCTGAGGCTC
GGCAACTACG TCATCGAGGA GAAGATCGGC TCGGGTAGCC AGGCCGATGT CTTTCTCGCC
CGCGACGTGG TGCTCGAGCG CCCCGTCGCG CTCAAGGTGT TCCCGCGCGC GCAAGCCTCG
CGCAACGCCC ACACCAGCCT GCGCGAGGCC CGGCTCATCG CCCGCCTCGA CGCGCCCACG
ATCGTCCGCG TCTATCACAT CGAGCAGACG CCGGCGCTCA ACTTCCTGGC CATCGAGTAC
GTCGACGGCG GCTCGCTCGA CGCGGTGGTG CGGCGCTCGG GCGCGGTGCC CGTGCGCCAG
GCGGTCAAGT TCGCGATGGC CGTGTTCGAC GGTCTGCAGC ACGCCCACGA GCTGGGCATC
GTGCACAGCG ACATCAACCC CAAGAACCTG CTGATCTCGA AGTCGGGGCA GCTCAAGATC
GCCGATTTCG GACTCGCGTT CTTGTGGGAG ACGCCGTCGA GCATGGGCGT CAAAGAGCTG
CGCGGCACGC CCCTGTACAT GGCGCCCGAG GTCTGGTCGG GGCAGAGCGC GACGCCGCTC
TCGGATATCT ACAGCGCGGG CGCGTGCCTG TACTTCATGC TCGTGGGCCG TCCGCCCTTT
GTCGAGTCCG AGCTCGATGC CCTGCGCAAG GCGCACCTCG AGCGCACGGT GCTCATCCCG
GCCGAGGTTC CCACCGCGCT GTCCGAACTC ATCCGCCAGT GCATGGCCAA GGACCCGGCG
CAGCGTCCAT CATCGGCGCG CGCCGTGCGC CAGAGTCTGA GCAGCTTTGT GAGCCGCGTG
CGCCGCCGGC GTTCGTCGGT GATTCCGAGC ACAGAGTCGG AGGCGGCAAA CAGCGAAGAA
GAGGCCAACG ATAGCGAGTC GGCGACCTCG GATCTGCCGC TGCTGGTGCG CGCGGAGGCC
GAGGCCGAGA TGCTCCACGT CGCCGTCTAC GCCGAGGCCA GCGAGAGCTT TGCCGCCGCG
CTGGCCGAGG AGTGTCCGCT GCTGGTGATG CACGGCGGTG AGGCCGAGGA GCGCAATGTG
CTGCTGCGGC GTCTGTTCGC CGATGACGAG AGCGGCATCG AGCGGCCGTC GATCGCGCGG
CTGGAAGTGG CGGTCGAGCC CGGTCACCTG CTCGCCGCGC TGGGCAGCCG CATGGGCTGC
TCGCCGGACG AGATCGACAA GATCACGAGT ATCCTCGAGC TGCTGTGTGG CTCGGTGGCG
GTGCGCAAGT CGCTCGGCTA CGTGCAGGTG TGTATCGCGG GGGCGATCGA CGAGACCGAC
GCGATCAGCA TGATCGAGCT GGTCAATGCG GCGCGCGCGC GGCTGGTCGG CTTCGTGCTC
GCGTGCGCGA CCGACGACGC CGATCTGGTC GCGCAGGCGG CCCAGGCGTA TTCGCTGCCG
GTGGCCACGG CGCGGCTGAG CGGCATGGAC GCCGACAGCG CGGCCCGCTA TCTGGTGGCC
TGGACCCGGC GCGCGAGCGG GGGCAAATTC GGCTGGTCGC ACGATGCGCT GTTGCTCGCC
TGCGACGCCT TCGAGCAGCG CAGCTCGCCG CTGATCGTGC GCTGGCTCGA GGACCTGGCG
GTCAACGCCA TCTATCTGGC CGCGCACGCC CACATGCGGC TCATCACCTC GTGGTGCGTG
AGCGGCGCGA TCAAGCACAC CAGCCGCATC GAGCGCATCG AGGATATCGT GCCGAGCTGG
CGGCAGCGGC CGGTGGTGTG GCCGCCGCCC GAGCTGCTCA CCAAGCTCGG CGAGCTGCGC
GCGCGGTGGC CGAATCTGGC CCAGGATCTG CCGGCGACAG GCGAAGACGC CAATCGCGTC
GGCAGCTCGA CCCGGCAGTG A
|
|---|
| Protein sequence | MSHPRGQSSS RARLHRGLRL GNYVIEEKIG SGSQADVFLA RDVVLERPVA LKVFPRAQAS
RNAHTSLREA RLIARLDAPT IVRVYHIEQT PALNFLAIEY VDGGSLDAVV RRSGAVPVRQ
AVKFAMAVFD GLQHAHELGI VHSDINPKNL LISKSGQLKI ADFGLAFLWE TPSSMGVKEL
RGTPLYMAPE VWSGQSATPL SDIYSAGACL YFMLVGRPPF VESELDALRK AHLERTVLIP
AEVPTALSEL IRQCMAKDPA QRPSSARAVR QSLSSFVSRV RRRRSSVIPS TESEAANSEE
EANDSESATS DLPLLVRAEA EAEMLHVAVY AEASESFAAA LAEECPLLVM HGGEAEERNV
LLRRLFADDE SGIERPSIAR LEVAVEPGHL LAALGSRMGC SPDEIDKITS ILELLCGSVA
VRKSLGYVQV CIAGAIDETD AISMIELVNA ARARLVGFVL ACATDDADLV AQAAQAYSLP
VATARLSGMD ADSAARYLVA WTRRASGGKF GWSHDALLLA CDAFEQRSSP LIVRWLEDLA
VNAIYLAAHA HMRLITSWCV SGAIKHTSRI ERIEDIVPSW RQRPVVWPPP ELLTKLGELR
ARWPNLAQDL PATGEDANRV GSSTRQ
|
|---|
| |