| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Hoch_6552 |
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| Symbol | |
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| ID | 8548969 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Haliangium ochraceum DSM 14365 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013440 |
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| Strand | - |
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| Start bp | 8996282 |
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| End bp | 8997451 |
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| Gene Length | 1170 bp |
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| Protein Length | 389 aa |
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| Translation table | 11 |
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| GC content | 69% |
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| IMG OID | 646391214 |
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| Product | homogentisate 12-dioxygenase |
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| Protein accession | YP_003270913 |
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| Protein GI | 262199704 |
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| COG category | [Q] Secondary metabolites biosynthesis, transport and catabolism |
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| COG ID | [COG3508] Homogentisate 1,2-dioxygenase |
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| TIGRFAM ID | [TIGR01015] homogentisate 1,2-dioxygenase |
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Plasmid Coverage information |
| Num covering plasmid clones | 8 |
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| Plasmid unclonability p-value | 0.0724494 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 15 |
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| Fosmid unclonability p-value | 0.194858 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | GTGATCGAAC GGATCGTGGC CGGCGAGGTC CCGGCCAAGC ACCACATCGC CATGCGTCAG
GGCGATGGTT CGCTGTACGT CGAGGAGTGC TTCACGCGCC GCGGCTTCGA CGGCCCGTAC
ACGATCCTGT ATCACCAGAA CCGGCCGCAC ACGCACCGGG TCGCGGCCGA TCTCGGGCGC
GGCTTCGCGG CGCCCGTGCG CGCCCAGAGC GACCTCGAGC GGCCCCTGGC CAAGCGCCAC
TACCGCTCGC AGACGCTCAG CTCGGCCGGC GACATGCCGG TCAACTGCCG CACGCCGCTG
CTGTTCAACC GCGACGTGGT GCTGTCGATC GTGCGCCCCG ATCGCGACGA CGACGTGTAC
TTCAGCAACG GCGATGGCGA CGACCTGTAC TACATCCACG AGGGCGGCGG CACCCTGCGC
ACGCCGCTCG GCGACCTGGC CTTCTCTGCC CGCGACTACG TGTTCGTGCC CAAGGGCATG
TTGCACCGCT TCGTGCTCGA CGCCGGCAGC CAGTACTGGC TGTCGATCGA GTGCCTGGGC
GGCATGGGCC TGCTGGCGCA GTGGCGCAAT GATGCCGGCC AGTTGACCAT GGACGCGCCC
TACTGCCACC GCGATTTTCG CGCGCCGAGC TTTCGCGGAC CGGTGGACGA AAACATCCGC
GGCTGCGCGG TCAAGCGCGA GGGCCGCTTC TTCGGCTTTC GCCTCGATCA CTCGCCGCTC
GACGTGGTCG GGTGGGACGG CGCCTGCTAT CCGTTCGTGT TTCCCATCCT GGCGTTTCAA
CCGCGCGCCG GGCTGGTGCA CCTGCCGCCC ACCTGGCACG GTACCTTCGC CGCCCGCGGC
GCGCTGATCT GCAGCTTCGT GCCGCGGATG CTCGACTTCC ACCCCGACGC GATTCCCTGC
CCCTATCCCC ATCACTCGGT GGATTGCGAC GAGTTTTTGT TCTACTGCCA CGGCAACTTC
AGCTCGCGCC GCGGCGTCGG CGCCGGCAGC ATCTCGCACC ACCCCAGCGC CCTGCCGCAC
GGCCCGCACC CGGGCGCCTA CGAGGCCAGC CTGGGCGAGC GGCGCACCGA GGAGCTGGCC
GTGATGGTCG ACACCTTCGA GTCGCTGCAC CCGACCGAGG CGGCGCTGGC CATCGAAGAC
CCCGAGTACC ACGACAGCTT CTTGCCCTGA
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| Protein sequence | MIERIVAGEV PAKHHIAMRQ GDGSLYVEEC FTRRGFDGPY TILYHQNRPH THRVAADLGR
GFAAPVRAQS DLERPLAKRH YRSQTLSSAG DMPVNCRTPL LFNRDVVLSI VRPDRDDDVY
FSNGDGDDLY YIHEGGGTLR TPLGDLAFSA RDYVFVPKGM LHRFVLDAGS QYWLSIECLG
GMGLLAQWRN DAGQLTMDAP YCHRDFRAPS FRGPVDENIR GCAVKREGRF FGFRLDHSPL
DVVGWDGACY PFVFPILAFQ PRAGLVHLPP TWHGTFAARG ALICSFVPRM LDFHPDAIPC
PYPHHSVDCD EFLFYCHGNF SSRRGVGAGS ISHHPSALPH GPHPGAYEAS LGERRTEELA
VMVDTFESLH PTEAALAIED PEYHDSFLP
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