| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Hoch_6534 |
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| Symbol | |
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| ID | 8548951 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Haliangium ochraceum DSM 14365 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013440 |
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| Strand | + |
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| Start bp | 8966330 |
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| End bp | 8967982 |
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| Gene Length | 1653 bp |
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| Protein Length | 550 aa |
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| Translation table | 11 |
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| GC content | 71% |
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| IMG OID | 646391197 |
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| Product | benzoate-CoA ligase family |
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| Protein accession | YP_003270896 |
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| Protein GI | 262199687 |
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| COG category | [I] Lipid transport and metabolism |
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| COG ID | [COG0365] Acyl-coenzyme A synthetases/AMP-(fatty) acid ligases |
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| TIGRFAM ID | [TIGR02262] benzoate-CoA ligase family |
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Plasmid Coverage information |
| Num covering plasmid clones | 12 |
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| Plasmid unclonability p-value | 0.924128 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 27 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | GTGGACCATT CCATCACGCT CGCGACCGGC CCGCAGGGCA ACGACATCGA CTTCTCGCCG
GTGTTCAACG TCGCGGTGCC GTTCATCGAC CGCCACCTTC GCGAGGGGCG CGCTCAGCGT
CCGGCCATTC GCACGTACGA CGGCGAGACC GTCGATTACG CGCAGCTCGC CGAGCGCGTC
AACCGCTGCG GCAACGCGCT GCTGGCGGCG GGGCTCGAAC GCGGTCAGCG CGTGCTCATG
ATCGTGCGCG ACTGCCCCGC GTTCTTCTAC CTGTTCTGGG GCGCGATCAA GGCCGGCATC
ATCCCGGTCC CGGTCAACAC GCTGCTGCGC CACGGCGACT ACGCGTACAT GATCGACGAC
GCCGAGCCCG CCGGGCTGGT GTTCTCGGCC GTGCATGCGG CCGAGGTCGC GGCCGCGCTG
GCTGAGGCCG AGCATCGTCC CGGGCTGGTC CTGCAGATCG AGGCCGGAGC CGGCGCCGCG
CCCGGTGACA GCGACCTGGC CGCGCACATG GCGCGCGCCG ACGCCGCGCT CGAGCCGGCG
CCGAGCGGGC CTGAGGACGA TTGCTTCTGG CTGTACTCCT CGGGTTCGAC CGGGCGTCCG
AAAGGCGCCG TACACGCGCA CCGCGACATG GTGGTCAGCA GCCAGCGCTA CGGCGTCGAG
GTGCTGGGCG TGAGCGAGGA CGACGTGTGC TTCTCGGCGG CCAAGCTGTT CTTCGCCTAC
GGCCTGGGCA ACGCCATGAG CTTCCCGCTG TGGGTCGGCG CCTGCGCCGT GCTGCTCGCG
CCCAAGCCCA CGCCGCAGCT CAGCTTCGAG GTCATCGAGC GCCATCGGCC GACGCTGTTC
TTCGGCGTGC CCACGCTCTA CGCCGCGCAG CTCAAGGCGC TGGCCGCGGC CGAGAAGGCG
CCCGCGCTGG ATTCGCTGCG CCTGTGCACC TCGGCCGGCG AGGCGCTCTC GCCCGAGCTT
CTGCGGCGCT GGAAAGAGCG CACCGGCCTC GACATCCTCG ACGGCATCGG CTCGACCGAG
GCGCTGCACA TCTTCTTGAG CAACCGCGAG GGCGACATTC GCCCGGGCGC CAGCGGCACG
CCGGTGCCCG GCTACGAGGT GCGCATCGTC GACGAACACG GCCAAGCAGT GGCCGCGGGC
GAGAGCGGCT CGCTCGAGAT CCGCGGCGAC TCCATCGCCC GCTACTACTG GAAGCAGCCC
GAGCGCACGG CCGAGACCAT GGGCAGCGGC TGGCTCAAGA CCGGCGACAC CTACCTGCGC
GACGCCGACG GCTACTACGT GTACTGCGGC CGCAGCGACG ATATGTTCAA GGTCGGCGGC
ATCTGGTGCT CGCCCTTCGA GATCGAGGCC CGCCTGGTCG AGCATCCCCA GGTGCAAGAG
GCGGCCGTGG TCAAACGCGC CGACGCCCAG GGCCTGGACA AACCCGAGGC CTGGATCGTC
CTCGATGCGC CCGAGCGTCT GGGCGACGCC GAGGCGCTGG CGCAGCTCGA GGCCGAGCTG
GTCGCGCACT GCAAGCAGGC GCTGGCGCGC TACAAGTTCC CGCGCTGGTT CCGCTTTGTG
GACAGCTTGC CGAAAACCGC CACGGGCAAG ATCCAGCGCT TCAAGCTGCG CGCGGCCCCG
GGCGCTGACA AGGCCGCCGA CACGGCCGAG TAA
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| Protein sequence | MDHSITLATG PQGNDIDFSP VFNVAVPFID RHLREGRAQR PAIRTYDGET VDYAQLAERV
NRCGNALLAA GLERGQRVLM IVRDCPAFFY LFWGAIKAGI IPVPVNTLLR HGDYAYMIDD
AEPAGLVFSA VHAAEVAAAL AEAEHRPGLV LQIEAGAGAA PGDSDLAAHM ARADAALEPA
PSGPEDDCFW LYSSGSTGRP KGAVHAHRDM VVSSQRYGVE VLGVSEDDVC FSAAKLFFAY
GLGNAMSFPL WVGACAVLLA PKPTPQLSFE VIERHRPTLF FGVPTLYAAQ LKALAAAEKA
PALDSLRLCT SAGEALSPEL LRRWKERTGL DILDGIGSTE ALHIFLSNRE GDIRPGASGT
PVPGYEVRIV DEHGQAVAAG ESGSLEIRGD SIARYYWKQP ERTAETMGSG WLKTGDTYLR
DADGYYVYCG RSDDMFKVGG IWCSPFEIEA RLVEHPQVQE AAVVKRADAQ GLDKPEAWIV
LDAPERLGDA EALAQLEAEL VAHCKQALAR YKFPRWFRFV DSLPKTATGK IQRFKLRAAP
GADKAADTAE
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