| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Hoch_6527 |
|---|
| Symbol | |
|---|
| ID | 8548944 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Haliangium ochraceum DSM 14365 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_013440 |
|---|
| Strand | + |
|---|
| Start bp | 8958523 |
|---|
| End bp | 8959278 |
|---|
| Gene Length | 756 bp |
|---|
| Protein Length | 251 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 64% |
|---|
| IMG OID | 646391190 |
|---|
| Product | protein of unknown function UPF0157 |
|---|
| Protein accession | YP_003270889 |
|---|
| Protein GI | 262199680 |
|---|
| COG category | [S] Function unknown |
|---|
| COG ID | [COG2320] Uncharacterized conserved protein |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 13 |
|---|
| Plasmid unclonability p-value | 0.552897 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 28 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGGGGAAGC GCGCAGGATC TGGCAGTGAA CGCTTCGCAG CGGCCCGCGC TGCGCGTCGC
TTCCTGCGCG AACTCAGCGG CCGAAATCTC GGTCCTGTAG CCGACAATCA TATCAACGGC
GAGCCCCTGC TCGACTTCGT CCGCCGCGTC AGCTCACTGG ACAGCCCGAC ACTCGAACTC
CCACGTAAGG ATTACGATCC CGCGTGGCAT GTCTGGTTCG CCGCCGAACG CCAGCAAATG
GCCAGTACTC TCGTAGGATT GCGCATCGTG GACGTCGAGC ACATCGGCAG CACGGCGGTG
CAGAGTATGT CGTCGAACGA CATCGTGGAC ATCGCGCTTC GGGTCGAGGG CGACCCCGCC
GAGGCGCTCG AGCGCCTGCG CCTGCTCGGC TATCGCTGCT ACGGTCCGAG CCCTTTCGGA
CCGTCGATCT GGTGGGCGTG GCGCACCGAA GAATCCCGCG CATTTGCCGT GCACGTCGGC
GCCGCGGACG CGCCCTGCTT CGCCGACGCG CGCCTGTTCT GCGAGTACCT GAGCGCGCAC
CCCGAGGAAC GTCGGCGCTA CACTCTCGCC AAACGTGCAC TGTTCGATAA AGCTTCGGGA
AAATTCGGTT ATGCGTTGCG AAAACAGCCT TTGATTTTCG ATATCATCGA TCGCGCTCAG
CGCTGGCGTG CGGCCGCGGG GGAACAGGCG AATGTCGCCG TGGGCAGGGT GAGAGCCAGC
GAAGCAACGC AACCCGTGCG CAAGGGTCAC TGTTGA
|
|---|
| Protein sequence | MGKRAGSGSE RFAAARAARR FLRELSGRNL GPVADNHING EPLLDFVRRV SSLDSPTLEL
PRKDYDPAWH VWFAAERQQM ASTLVGLRIV DVEHIGSTAV QSMSSNDIVD IALRVEGDPA
EALERLRLLG YRCYGPSPFG PSIWWAWRTE ESRAFAVHVG AADAPCFADA RLFCEYLSAH
PEERRRYTLA KRALFDKASG KFGYALRKQP LIFDIIDRAQ RWRAAAGEQA NVAVGRVRAS
EATQPVRKGH C
|
|---|
| |