Gene Hoch_6517 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagHoch_6517 
Symbol 
ID8548934 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameHaliangium ochraceum DSM 14365 
KingdomBacteria 
Replicon accessionNC_013440 
Strand
Start bp8947173 
End bp8947985 
Gene Length813 bp 
Protein Length270 aa 
Translation table11 
GC content71% 
IMG OID646391180 
Producthypothetical protein 
Protein accessionYP_003270879 
Protein GI262199670 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones26 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones31 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCGTCGCC TCAACGCCCG CTCCTGTCTG CGCGCGACCA GCATCGCGCT GGTGGCCACG 
GTGTGGCTCA GCGCCACCCT GTTCGGCCTG TACATCCTCG CCTTCTACGC CGCCGCCCTG
CTCGACGGCG ACATGGCGAG CTGGAACGGC GTGCTGCCCG GCCTGTACCG GGCCGATCGC
GGCACGGCGA CCGTCGGCAT CGGCCTGCAC TTCGCCGCCG GCGGCGTCAT CTTGCTCCTG
GGCTGCATCC AGCTCGTGAG CGCGCTCCGG GTGCGCTATC CCGCCGTGCA CCGCTGGCTC
GGACGCGTGT ACGCAATCGC CGCGCTGCTC ACCGGTGTCG GCGGGCTGAT CTTCATCGCC
GTGAGCGGCA CCATCGGCGG CGCCGTCATG GACCTCGGCT TCTCCATCTA CGGCGTGCTG
ATGGTGCTCG CGGCCATCGA GACCGTGCGC CACGCCCGCG CCGGACGCAT GGAACGCCAC
CGCGCCTGGG CCCTGCGCCT GTTCGCCCTG GCCATCGGCT CGTGGCTGTA CCGCATGGAC
TACGGTTTCT GGGCGCTGCT CGCCGACAAC GCCGGCCACA CCCGCGACTT CCGCGGGCCT
TTCGATCGCG TGATGGCCTT TTTCTTCTAC GTGCCCAACC TGATTCTGGT CGAGGTGCTC
ATCCGCGCGC GCCGCGACGC GCTGCCCGCG GGCGTGTACC TGGCCGCCGC CGGCGCGCTG
GCCTGCGCCA CCGGCTTCCT GCTGCTCGGC ACCTACTTCT TCACCCGCTA CTACTGGGGC
CCCGCGATCC TGGCGCGCGT CCTCGGCGCC TGA
 
Protein sequence
MRRLNARSCL RATSIALVAT VWLSATLFGL YILAFYAAAL LDGDMASWNG VLPGLYRADR 
GTATVGIGLH FAAGGVILLL GCIQLVSALR VRYPAVHRWL GRVYAIAALL TGVGGLIFIA
VSGTIGGAVM DLGFSIYGVL MVLAAIETVR HARAGRMERH RAWALRLFAL AIGSWLYRMD
YGFWALLADN AGHTRDFRGP FDRVMAFFFY VPNLILVEVL IRARRDALPA GVYLAAAGAL
ACATGFLLLG TYFFTRYYWG PAILARVLGA