Gene Hoch_6514 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagHoch_6514 
Symbol 
ID8548931 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameHaliangium ochraceum DSM 14365 
KingdomBacteria 
Replicon accessionNC_013440 
Strand
Start bp8942986 
End bp8944941 
Gene Length1956 bp 
Protein Length651 aa 
Translation table11 
GC content68% 
IMG OID646391177 
Producthypothetical protein 
Protein accessionYP_003270876 
Protein GI262199667 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones18 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones28 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAATCGAT TCCGTCCCAG CGTCCTGGTG AGCGCGTCTG CGCTGCTCGC CGCCTGTCAG 
CTCACGCCTC CGCCACCCGA GGTGAGCACC CGCAGCCACG CCCTCGTCGC GCAAGAGGCC
CTGGTTCACC CCGCGGATAT CTCAGGGGGA GACAGTTTCG GCCGCGGTTT CGCCGTGGAC
GGCGACTATT TGATCGCCGG TTCCTACGGC GCCAACGCCG CGGGCTCGAG CACGGGCAAA
GCCGATGCCT TCCGCTGGGA CGGCAGCGCC TGGGTGGAAG AGGACCTCAC TCTGCCCGCC
ACAGTCGCCG ATTATCATTA CTTTGGCGCG GCCATTTCGA TCGATGGCGA AGAAGCCGCC
ATCGCGTCCG CGGGCAGCAC GCTCACGCGC ATCGAGGGTT CGGTATATTT GTACGCACGC
GAGGACGGGG TGTGGACCGA CGGCGTGCGC ATCCAGTCGC CGGCGACCGT GGACGGCGGC
TACTTTGGCT ACGACGTCAA ACTCTCGGGC GACGAGCTGT TCATCGCCGC GCCCAACGAG
GGCGGCAACG ATGAGGGCGT GGTGTACTTG TATGAGCGCG ACCCCGTCTC GGGAGCCTGG
CACCACGTCG GCCAGATCAT GTCCCCGAAC CCATCGGTGA ACGAGGGCTT TGGCTCGTCG
ATCGCGTTCG ACGGCGACGT GCTGGTGGTC GGCGCCACGG GTCACGACAT CGGCGACGCC
ATCGACACCG GTATGGTCTA CGTGTTCCGC CGCGGCGCCG AGGGCTGGCA GTTCGAGACC
GCGCTGCCGC CGCTCAGCCC GGCGCCGTCG CTGCGCCTGG GTAAGCTGAG CAGCCTCGCG
GTCGAGGGCG ATCTCATCGC CGTGGGCAAC TACGAGGAGA ACACCTACTT CGACAACAAC
GGCGCGGTCC ATCTCTACGC CTACGACGGC ACCACCTGGA ACCTCGATAC CACGCTGTGG
GCCGCGGATC CCGCGCATAT CGCCAGCTTG GGCTGGAGCC TGGCGCTGCG CGGCGACCGG
CTGGTGGCCG GGGCCATGAA CGCCGACGGC GTGTCCCGTC GTTCGGGCGC GGTGTACGTG
TTCGAGCGCG ACGCCAGCGG TGCCTGGACG CAGCGCGACA AGGTCTTTCC GAGCGCGAGC
TACGGCTACG ATCGCGTCGG CTCTTACGTG GGCATGCGCG GCGCGCAGAT CCTGGCCTCA
GCGCCCTCGT CGGACATCTA CGGCACCTGG ACCGGCGCCG TGTACGCCTT CGATCTCGCC
GAGTGCCCGT CCGCGGACGA GCTAGGCGCG GGCGAATTCT GCACGCCCGA GTGCCCGTGT
GCCCACGGCG AAGGCGACTG CGACGACCCC GAGGACTGCC TGAGCGGCCT GTGCCTGCGC
GACGCCGGCC TGCAGTTCGG CTACGACGAC CCCGATCTCG ATGTATGTTC GGACGTGTGT
CCTACGACCG GCGTGGGCGC GGGCAACTAC TGCACGCCCG AGTGTCCGTG TGCGCATGGC
GAGGGCGACT GCGACAGCGA CGAGGACTGC GCGGGCGGCC GGTGTTTGCA GAACGTGGGC
CTGGACTTTG GCTATGACGA CCCCGGACTC GACGTGTGTT CGACCGAGTG TCCGGAACCG
GGTCAGGTGG GCGTGGGCGA GTTTTGCACG CCCGAGTGTC CGTGCGAGCA CGGCGAAGGC
GACTGCGACA GCGACGAGGA CTGCGTGAGC GGCCTGTGCT TGCGCGACGC GGGCCCCGCC
TTTGGCTACG ACGACAGCGA GATCGACGTG TGCTCGAATA TCTGCCCCAC GCTCGGCGTG
GGCTCGCTCG ACTACTGCTC GCCCGCGTGT CCGTGCGATG CGGGCGAGGG CGACTGCGAC
GGCGACGCAG ACTGCGCGCC GGGCCTGTCC TGCACCGACA ACGTCGGGCC CTCGTATGGC
TTCCCCGCCG AGGTGGACGT GTGCGAGTCG GCGTGA
 
Protein sequence
MNRFRPSVLV SASALLAACQ LTPPPPEVST RSHALVAQEA LVHPADISGG DSFGRGFAVD 
GDYLIAGSYG ANAAGSSTGK ADAFRWDGSA WVEEDLTLPA TVADYHYFGA AISIDGEEAA
IASAGSTLTR IEGSVYLYAR EDGVWTDGVR IQSPATVDGG YFGYDVKLSG DELFIAAPNE
GGNDEGVVYL YERDPVSGAW HHVGQIMSPN PSVNEGFGSS IAFDGDVLVV GATGHDIGDA
IDTGMVYVFR RGAEGWQFET ALPPLSPAPS LRLGKLSSLA VEGDLIAVGN YEENTYFDNN
GAVHLYAYDG TTWNLDTTLW AADPAHIASL GWSLALRGDR LVAGAMNADG VSRRSGAVYV
FERDASGAWT QRDKVFPSAS YGYDRVGSYV GMRGAQILAS APSSDIYGTW TGAVYAFDLA
ECPSADELGA GEFCTPECPC AHGEGDCDDP EDCLSGLCLR DAGLQFGYDD PDLDVCSDVC
PTTGVGAGNY CTPECPCAHG EGDCDSDEDC AGGRCLQNVG LDFGYDDPGL DVCSTECPEP
GQVGVGEFCT PECPCEHGEG DCDSDEDCVS GLCLRDAGPA FGYDDSEIDV CSNICPTLGV
GSLDYCSPAC PCDAGEGDCD GDADCAPGLS CTDNVGPSYG FPAEVDVCES A