Gene Hoch_6507 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagHoch_6507 
Symbol 
ID8548924 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameHaliangium ochraceum DSM 14365 
KingdomBacteria 
Replicon accessionNC_013440 
Strand
Start bp8937132 
End bp8938283 
Gene Length1152 bp 
Protein Length383 aa 
Translation table11 
GC content70% 
IMG OID646391170 
Productglycosyl transferase group 1 
Protein accessionYP_003270869 
Protein GI262199660 
COG category[M] Cell wall/membrane/envelope biogenesis 
COG ID[COG0438] Glycosyltransferase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones13 
Plasmid unclonability p-value0.961113 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones27 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
GTGAGCCGCG TGGTCCTGGC CAGCTTCGAC CGCGTGCCCA GCCCCAAGGG CGCGAGCGCG 
CACATCTTGG CCAACGCCGA GATCCTGTCG GCCGCGCACG AGGTCTCGCT GGTCACCCTG
GGCGATCAGC CCGCGCCCGG CTGGCGCCAT CGCCCGCTGC ACATCGCCGA GCCCAACTGG
CTGGCGCGGG CGCGTCGTTT CCACGAGCGC GTCGGCCAGG TGTTCGAAAA CTACGACTTC
GACATCTACC ACGTGCGTTC GCCCTGGGAG GGCCTGGCCG CACCCGCGCA CCTGTTCCCC
GGGCGCCGGC TGGTGTACGA GGTCAACGCG CTGTACAGCA TCGAGGCCCA GTACCATTTC
CCCGACACCA TCCACCTGCC GTCGATCCGC GACAAGCTGC GCGCGCTCGA GCTGTGCCTG
CTCGACCGCA GCGACCGCAT CCTCACGCCC TCGCGTGTGA CCCAGCGCTA TCTCGAAGAC
CTCGGCGTGC CCGCCGAGCG CATCACGGTG GTGCCCAACG CGCCCAGCGT GGACTTCGTC
GCGGCCGAGG GCGCGGCCGA GGGCGACATT ACCGATATCG ACCGTACGTC CGACGATATT
CTGAAGCTGG TGTATATCGG CACCCTGGCG CCGTGGCAGG GGTTGCCCGA GCTGATCACG
GTGCTGCCGC GGCTCACCCG GCGCTTTCAC CTCACGGTGT TGACCGCGTC GTCGCGTCAG
CGCATCAAGG CCGTGCGCAA GCTGGCGGCC AAGCGCGGCG TGGCCGAGCA CGTGCACATC
GCCGAGCCGC TGCCGCCGGG CGAATTGGGC GCGTTTCTGG CCACCCAGGA CATCGCGCTG
GCGCCGCTCA TCCCGTGCGA GCGCAACCTG GTGCAGGGCT GCATGCCGAT CAAGCTGCTC
GACTACGCGG CCTGCGGGTT GCCCATCCTA GCCCCCGACA TGCCCGTGGT GCGCGACGTG
CTCGGCGACG AGTACGCGCT GTATCGCCGC TGGGGCCGCA GCGGCATGGC CGAGCTGCTC
GAGGAGCTGA TGCACACGCC CGCGCTGCGC CGCTCGCTGG CCGCGCTCGG CCAGGCGCGG
GTGCGCGAGC GCTTCTCGCA CGCGGCCCAG CGAGCGGTTT TGGGCGCGGT GTACGAGGAA
CTCGCGGCGT GA
 
Protein sequence
MSRVVLASFD RVPSPKGASA HILANAEILS AAHEVSLVTL GDQPAPGWRH RPLHIAEPNW 
LARARRFHER VGQVFENYDF DIYHVRSPWE GLAAPAHLFP GRRLVYEVNA LYSIEAQYHF
PDTIHLPSIR DKLRALELCL LDRSDRILTP SRVTQRYLED LGVPAERITV VPNAPSVDFV
AAEGAAEGDI TDIDRTSDDI LKLVYIGTLA PWQGLPELIT VLPRLTRRFH LTVLTASSRQ
RIKAVRKLAA KRGVAEHVHI AEPLPPGELG AFLATQDIAL APLIPCERNL VQGCMPIKLL
DYAACGLPIL APDMPVVRDV LGDEYALYRR WGRSGMAELL EELMHTPALR RSLAALGQAR
VRERFSHAAQ RAVLGAVYEE LAA