Gene Hoch_6494 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagHoch_6494 
Symbol 
ID8548911 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameHaliangium ochraceum DSM 14365 
KingdomBacteria 
Replicon accessionNC_013440 
Strand
Start bp8919464 
End bp8921935 
Gene Length2472 bp 
Protein Length823 aa 
Translation table11 
GC content72% 
IMG OID646391157 
Producthypothetical protein 
Protein accessionYP_003270856 
Protein GI262199647 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones19 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones21 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCCGCCGC GCCCGTCACG CACGCGCTCG CGACGCCAGG GCCGACGCCG CGCCGGCGCC 
TCGCTGGCGC TCGCGCTCGG CCTGCTGCTG CTGGCGCTGC CCCCGGCCGC CGCGCAGAGC
GCCGCGCCCC AGGAGCTGGG CGACATCGGC CGCCGCGTCG GCGAGCTGCG CGACGAGCTG
GCCGCCCTGG GCAACGGCAT CGAGGCCCCC GACCGCTCGC CCGAGGCCGC GCGCGCGCGC
GCCCATCGCC ACCTCATCGA CGCCCAGGTG GCGCACGGCA CCGGCGACTA CGACACCGCC
GCCGTCATGC TCTACGACTA CGTCGAGTCG CACCCGCGCA GCCGCTCGTA CGCCTCGGCC
CTGTTCTACC TCGCCGACTC GCTGTTCGAG CGCGGCGACC ACCTGGCCGC GCGCGAGCGC
TTCGTCGAGC TGCTCACGCG CATCGGCCCG CACAGCAGCT TCTACCAGCA GACCCTCGAG
CGCCTGATCG AGCTGTCGCT GGCGCTGCGC GACGACACCG ACGTGGCCCG CTGGCTGGCC
GCCCTCGACC AGGTCCCGGC CGAGCGCCTG CGCCCCTCGG TGCACTACGT GCGCGGCAAA
TACGCCTACT TCCGCGACCG CCACCAGCAG GCCATCGACC ACTTCGCGCG CGTGCCCATC
CCGGCCGAGT ATTTCTTCCA GGCCCGCTAT TTCCTGGGCG GCGCCTACGT CGCCCAGGGC
AACCTCGAGC TGGCCGAGGC CGTGTATCGC GACCTGGTGG CGCGGCCGCC GCGCGGCAAA
GACGACGTCC GCGTCATCGA CCTCTCGCAC CTGGCGCTGG GCCGCATCCT GTACGAAAAC
GACCGCCTGG TCGAGGCCGT GGACGCCTAC CTCGATGTCG ACCGCAAGTC CGATCTCTTC
GAAGACGCCG CGTACGAAAT CGCCTGGGTG TTCGTCAAGC AGGGCAAGTT CGACAAAGCC
CTGCTCGCCA TCGAGCTGCT GGCCCAGATC GCGCCCGCGA CCTCGCTGGT GCCCTCGGTC
GAGATCCTCG AGGGCAACCT GCGCATCCGC AAAGCCAAGG CGCTGGGCAC CAGCGACAGC
GCCGAGAGCG AGGCCGAGTA CGAGCGCGCG CTCGAGGCCT TTGAGAAGAA CCGCGTGCGC
TTCGCCGAGG CCCACGACGA GCTCACCCGC GTGGTCGAGG AGCACGCCGA CCCGCGCGCG
TTCATCGACC AGCTCGCCGG CCGCACCTCG CAGACCTTCG AGCTGCGCGC CACCCTGCCC
GAAGTCGCCG CCATCTGGCT GCGCCAGCAC CCGGGCGTCG AGCGCGTGGT CGCGGTCGAG
CAGAACCTCG AGCAGATCGC CGACGACGTC GCCAGCGCCG AGCGCTCCAT CGAGCGCCTG
GAGCAGGCCC TGGCCGAGCC CGCGCGCTTC CAGGTGTTTC CCAGCCTGGC CAGCAAGCGC
GTGCGCAGCA TCGAGATCCT CGAAGAACTC CAGGCGCTGA GCGCCGCCGC CATCGACGCC
GCCGGGCCCA TGCTGCGCCG CCACGCCACC GACGAGGAGC GCAGCCGCCT GGCCGCGCTC
GGCGAGCAGC GCCAGGGCCT GCTGCGCAGT CAGCGGCTGC TGCCCTTTGG CGAATCGGCC
TACGGCGAGC GCATCGCGCG CACCCGCAAC GCCTTCGTCG ATCTCGCCGG CGAGACCGCC
GAAGCCACGC GCGTGGCCGA CGCCGCCGCC GCCACCCTGG TGGCCTTTGA GAAGTATCTG
CAAGACCGCG AGGCCAGCGC CGGCGGCAAG GGCGCCTCGG CTGAGACCCG GGCCGACATC
GCCGCCATGC GCGAAGAGCT CGAGCAGCTC CGCGCCGAGC TGAGCGAGCT GCGCCGCGAC
ACCACCCTGG CCAAAGACCG CGCCGGCACC GGCGACGAGA CCGCCCTGCG CGGCCACGAG
CTGCGCGCGC GCGTGCGCAG CGTGCTCGCC GAGGAGCGCG GCCAGATCCG GTCCATCGTC
GGACGCATGG ACAAGGGCAG CGCCGATCGC GAACCCGGCG CCGACCTGGT CACCGTGCTC
GGCGCCATCG AGACCCTGAG CGTAAGCATC GACGAGCTGC ACGCGCGCAT CGACGAGGTG
GTCGAGTTCT CGATCGCCGA CGCGCGCTCG GCCCTGGTCG AGGAGAAGGC GCGCCTGAGC
GTCATCAAGC GCGAACTCGG CGACTACGAG GCCGAGTCGC ACGAGATCGG CGGCGCCGTC
ATCGGCGCCA GCTTCGAGGC CGTCAAGCAC AAGATCTACG AGCTGCTCAT CCGCGCCGAC
GTCGGCGTGG TCGATGTCGG CTGGTCGAAA AAAGAAGACG CCGACGAGAG CGTGCGCCGC
AACAACCTCG ACGAGCTGCG CGAGCAGCGC CGCATCGACG ACGAGCTGCG CCTGCTGTTC
GAGACCCAGC CCGCCGGCAA CGGCGCCCGC GGCGGCAGCT CTGGCGCCCC CAGTGACGGA
GACGCGCCGT GA
 
Protein sequence
MPPRPSRTRS RRQGRRRAGA SLALALGLLL LALPPAAAQS AAPQELGDIG RRVGELRDEL 
AALGNGIEAP DRSPEAARAR AHRHLIDAQV AHGTGDYDTA AVMLYDYVES HPRSRSYASA
LFYLADSLFE RGDHLAARER FVELLTRIGP HSSFYQQTLE RLIELSLALR DDTDVARWLA
ALDQVPAERL RPSVHYVRGK YAYFRDRHQQ AIDHFARVPI PAEYFFQARY FLGGAYVAQG
NLELAEAVYR DLVARPPRGK DDVRVIDLSH LALGRILYEN DRLVEAVDAY LDVDRKSDLF
EDAAYEIAWV FVKQGKFDKA LLAIELLAQI APATSLVPSV EILEGNLRIR KAKALGTSDS
AESEAEYERA LEAFEKNRVR FAEAHDELTR VVEEHADPRA FIDQLAGRTS QTFELRATLP
EVAAIWLRQH PGVERVVAVE QNLEQIADDV ASAERSIERL EQALAEPARF QVFPSLASKR
VRSIEILEEL QALSAAAIDA AGPMLRRHAT DEERSRLAAL GEQRQGLLRS QRLLPFGESA
YGERIARTRN AFVDLAGETA EATRVADAAA ATLVAFEKYL QDREASAGGK GASAETRADI
AAMREELEQL RAELSELRRD TTLAKDRAGT GDETALRGHE LRARVRSVLA EERGQIRSIV
GRMDKGSADR EPGADLVTVL GAIETLSVSI DELHARIDEV VEFSIADARS ALVEEKARLS
VIKRELGDYE AESHEIGGAV IGASFEAVKH KIYELLIRAD VGVVDVGWSK KEDADESVRR
NNLDELREQR RIDDELRLLF ETQPAGNGAR GGSSGAPSDG DAP