| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Hoch_6484 |
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| Symbol | |
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| ID | 8548901 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Haliangium ochraceum DSM 14365 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013440 |
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| Strand | - |
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| Start bp | 8904166 |
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| End bp | 8907939 |
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| Gene Length | 3774 bp |
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| Protein Length | 1257 aa |
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| Translation table | 11 |
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| GC content | 76% |
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| IMG OID | 646391147 |
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| Product | Tetratricopeptide TPR_2 repeat protein |
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| Protein accession | YP_003270846 |
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| Protein GI | 262199637 |
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| COG category | [H] Coenzyme transport and metabolism |
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| COG ID | [COG3071] Uncharacterized enzyme of heme biosynthesis |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 7 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 23 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | GTGTCTTCGA CTGACTTAAT CCAGCAGGCC CGGCAGCAGT TCGAGCGCGG TTCGTTTCGG
GACGCCGCGG CTACCTGTCG TCGCGGCATT CTCTCCTTTC CCGAGGACGG CGAGATCCGT
TTGTGGTTGG GGCGCTCGCT CATGGGCCTC CAGCGCTACG ACGAAGTGCT CGCCGAGATG
CAGGTGCTGC TCGCGCGCCA GCCCGACAAC GCCCAGGCCT TGGCGCTGCG CGGCGAGGCG
CTGTACTACA CCGGCGAGCT CGACGGCGCG GTCAACGCGC TGCGCGAGGC CTGCCGGCTC
AACCCCTACG ACGCGGCCTC GCGCGCGCTG TGCGAGCAGG CCGACAACGC GCGCCACGGC
GACGGCGAAG ATCTGATCTT CGTCGACGAG GCCCCGAGCG ACGTGGTCAC CCGCCACTAC
GATATGTCGC AGGACGCCGA GGGCCGCTTT GCGCCTTCGT CCGAGGGCGG CACGGCCGAG
TTCTTCGACA GCCTGGGCGA TGGCGGCGCG GACGCGGGTG GCGCAGGCGC CCGCGGCGGC
GCCGGTGACT CCTTCGAAGA GCCGACCGCG ATCTACGACG ACGCCAGCAG CGCCTTTGGC
ATGCGCCTGC GGCCGCGGCC CGAGGCTGGC GGCGCGGCGG CCGGGCTGCC CGGCGAGGTC
GACAACGCGC TCACCGAGCT CGACGAGGAC GGCGGCGGCG ACTTCGCCGA GATGCCGCCG
ACCTCGATGA TTCAACTCGA CGCGCCGATG CAGGGACGGC AGAGATCTGC GCCGCCGGTG
CCGAGCCCGC GCGTCCCCGC GCAGCCGCTG AGGGCCGAGC AGCCGACCCG CGAATCCGAG
CCCATCCGGC CGCGCGCGGC CGAGCAGCCG ACCCGCGAAT CCGAGCCCAT CCGGCCGCGC
GCCTCCGCTC CGCAAGCGCA GCCGCGCTCG CCGTCCTCGG CCAGTCCGGG GCCGCGACTG
CGGCCAGACC CGGAACCGCG GCCGGCGCCG CGGCCGAGCG CGGTACCCGG GTCGGGGCCG
ACGGCTGCTC CGACATCGAT GCCCAGGTCG CCCTCGTCGC ACAGTCCGGC GCCGGTGCCG
CGCCCGCCGT CCGCGCCTGC GCCGAGCGCG CCGCCGCCGC CGGCCGGGAT ACAGTTGCCC
GCGCCCGCAG CCGCAGCCGC GCCCGTGTCG TATCCCTCGC TCGGCAGCGA CAAGCCGTCG
TCCACGCCCG CGGCCTATCC GCGCAGCGAC GCGGCCAAGC GCGCCTCCTC CACGGGCTCG
CGGCCGTCCG CCAGCGCCCC TCGTCCGCCC TCGCGGCAGT CCCAGGCCGC CGGCCCGGCG
AGCTACGAGC CGACCACGGC GGTGCCCCGG CAGTCGATGC CGCGGCGCCG CGTGTGGCCG
CTGGCGCTCG CGGCCGTGGT GTTTCTGGGC GGCGGCGTTT TCGGCGGGCT GGAGCTGCGC
AAGCTGCGCC TGCAGTGGGA AATCGACCAG GCACGCGCGC GCGCGGCCGA GCTGATGGCC
AGCGACGCCT TCCCCGGCTA CCTGGGCGCG CGCACCGTCT ACACCGAGAT CGCGCACGTG
CGCGCCGAAG CCGAGGACCG GGCGCTGTTG GCGCGTACCG ACGCCGCGCT GGCGGCCGAA
TTCGGCGCCG GCTACCCCGA GGCGCTGAGC GCGGTCGGCG CGCTGGGCGA GGACGGCCGG
GTCGATGCGC TGATCGCGCG CGCCTATCTG CGCCTGGCCG AAGACGACCT CGTCGGCCTC
GACGCGCGGG TTGACGATTT GACCGTCCAC GCGTCCGAGC ATCCGTTTGA GCCCTACCTG
CGCGGCCGCG AGCGCTTGCT GGCGGGTGAC GCCGCAGCCG CGGCCGAGGC CTTTGAGAGC
GCGATCGCGC GCACCGAGCG GCCGCTGTTC TCGGTGTGGC TGGGTCGCGC GCAGCTCGCG
CGCGGTGATC ACGCCGCCGC CGAGCAGAGC TTCGCCGCGG TGCTGGCCAC CGTGCCCGAG
CACCCGGCCG CGCTGCTGGG CCGCGCCGAG CACGCGCTGG CCGCGGATGA GGAGGCCGCG
GCCGAGCCTC TGGCGGCCTC GCTCGAGGCG CTGATCGCGC CGCCGCCGCA GCCGCCCAGC
GCCGACGCCG TGACGCCCTC GCCGGCGCAG CGCGCCGACG CCGCCCGGCT GCTGGTCGCG
TTGCGACAGC GCGCTGGCGA CAGCGAGGGC GCCCGGCGCG CGTTCGCCAC CCTGGCGGCC
GACAGCCTGG CCGATGAGCC CGGCGCGCTG GTGGCCGTGG CCCGCACGCG GGCGGCTCTG
GGCGAGACCG ACGCGGCGCT GGCCGAGCTC GGCCGCGGCG TCGAGACCTG GCCGGCGCGC
CTCGACATGC GCATCGCGCT GGCCGAGATG GCGCTGGCAA GCAACGCGCT CGCACCCGCG
CGCAAAGCCC TGATCGACGT CTCCGACCTG CAGGAGCGCA TCGCCGGCAG CCCGGCGGCG
CTGGGGCTGC GCGGCCGCGT GCACCTGGCC CTCGACGATC TCGACTCCGC AGCCGAGGAC
CTCGAGGCCG CGCTGGCCCT GCTCCCGGGC GACCTGGCCG CGACCCAGGC GCTGGCCCAG
GTTGCCCTGC GCCGCGGCGC GCCCCGGGAC GCGGTCGAGT TCCTCGAGCC GCTGATGAGC
GCGGGCGCCA GCGCCGAGAT CCAGCTCGCG TTCGCCACCG CCCTGCGCCG CAGCGGCGCG
TTCGAGCGCG CCGCCGAGGT GCTCGACACC ATGGCCAAGG CCGACGAACC CGAGCCCCGG
GTGATGCTCG AGCGCGCCCG GCTGGCGCGC GACCAGGGCG ACTGGGACCG CGCCCGGCGC
GAGTTCATCG CCGCGGCCGA GCGCGTGCCC GGCACCCCGA CGGCCACCGA GGCCATCATC
GACGCCGCCC GCCTGGCGCT CGACACCGGC GAGCGCCGAG CCGCGCGGCG GATTCTCGAG
CGCGTGCTCG GCGACGAGGC CGACGCGGTC GAGCCCGCCG TGCTCATCGA GGCCGCGCAC
GTGGCCACCG CCAGCGGCGC GCTCGCCGAT GCCCAGGGCT TCCTCGACCG GGCCGCGGCC
GGGGAGCTGA GCGGACCGGC GCAGGTGGCG CTGGCGCGCG AGCGCGGCCA TCTGGCGCTG
CGCCGGGGCA CGCTCGACAG CGCGGTCGAG CAGCTCGCGC TGGCCCACGC AGGCGCGCCC
AGCGACGGTG AAGCCGCGCT CTTGCTCATC GACGCTCGCC TGCAGCGCGA GGAGCTGGAG
CAGGCCCAGG CCGTGGCCGA TGCGTTGGCG GCCACGGCCG GCACGTCACC GGCCAGCCAG
CACCTGGCCG CGGGCTTGCT CGCCATGGCC AAGCGCGAAT TCGACACCGC CCAGGAGCGC
TTCGACCAGG CCGTGGCCGC GCTCGAAGAG GCTCAGGCCA CGCCGCGGCA GTTCGCGCGG
GCCCACATCC TGGCCGGCCG CGCCCTGTTC CAGGCCGACG AGCTGCGCGA CGCGAGCAAG
GCCCTCGAGC GCGCCATTCG CCTCGATCCC GCCGATCCCG AGCCCTACTT CGTGCTCGGC
ATGGTCGAGT ACGGACGCGG CGAGTACGAG GCCGCCGCCG ACGCCTTCGA GGCCTCACTC
GAGCGCGACA GCGAGTCCAC GCCCAAGGCC TGGTTTTACC TCGGCGAGGT AGAGCTCGAG
CGCAAGAAAG AGCGCGACGC CAAGAAGGCG TTCCGGGCCT TTCTCGAGCG CGTGGACGAC
GGACCGGAGG CCGAGCAGGC CCAGCGCTAC CTGCGCGAGA TCGGCGGGCG CTGA
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| Protein sequence | MSSTDLIQQA RQQFERGSFR DAAATCRRGI LSFPEDGEIR LWLGRSLMGL QRYDEVLAEM
QVLLARQPDN AQALALRGEA LYYTGELDGA VNALREACRL NPYDAASRAL CEQADNARHG
DGEDLIFVDE APSDVVTRHY DMSQDAEGRF APSSEGGTAE FFDSLGDGGA DAGGAGARGG
AGDSFEEPTA IYDDASSAFG MRLRPRPEAG GAAAGLPGEV DNALTELDED GGGDFAEMPP
TSMIQLDAPM QGRQRSAPPV PSPRVPAQPL RAEQPTRESE PIRPRAAEQP TRESEPIRPR
ASAPQAQPRS PSSASPGPRL RPDPEPRPAP RPSAVPGSGP TAAPTSMPRS PSSHSPAPVP
RPPSAPAPSA PPPPAGIQLP APAAAAAPVS YPSLGSDKPS STPAAYPRSD AAKRASSTGS
RPSASAPRPP SRQSQAAGPA SYEPTTAVPR QSMPRRRVWP LALAAVVFLG GGVFGGLELR
KLRLQWEIDQ ARARAAELMA SDAFPGYLGA RTVYTEIAHV RAEAEDRALL ARTDAALAAE
FGAGYPEALS AVGALGEDGR VDALIARAYL RLAEDDLVGL DARVDDLTVH ASEHPFEPYL
RGRERLLAGD AAAAAEAFES AIARTERPLF SVWLGRAQLA RGDHAAAEQS FAAVLATVPE
HPAALLGRAE HALAADEEAA AEPLAASLEA LIAPPPQPPS ADAVTPSPAQ RADAARLLVA
LRQRAGDSEG ARRAFATLAA DSLADEPGAL VAVARTRAAL GETDAALAEL GRGVETWPAR
LDMRIALAEM ALASNALAPA RKALIDVSDL QERIAGSPAA LGLRGRVHLA LDDLDSAAED
LEAALALLPG DLAATQALAQ VALRRGAPRD AVEFLEPLMS AGASAEIQLA FATALRRSGA
FERAAEVLDT MAKADEPEPR VMLERARLAR DQGDWDRARR EFIAAAERVP GTPTATEAII
DAARLALDTG ERRAARRILE RVLGDEADAV EPAVLIEAAH VATASGALAD AQGFLDRAAA
GELSGPAQVA LARERGHLAL RRGTLDSAVE QLALAHAGAP SDGEAALLLI DARLQREELE
QAQAVADALA ATAGTSPASQ HLAAGLLAMA KREFDTAQER FDQAVAALEE AQATPRQFAR
AHILAGRALF QADELRDASK ALERAIRLDP ADPEPYFVLG MVEYGRGEYE AAADAFEASL
ERDSESTPKA WFYLGEVELE RKKERDAKKA FRAFLERVDD GPEAEQAQRY LREIGGR
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