| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Hoch_6481 |
|---|
| Symbol | |
|---|
| ID | 8548898 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Haliangium ochraceum DSM 14365 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_013440 |
|---|
| Strand | - |
|---|
| Start bp | 8900360 |
|---|
| End bp | 8901235 |
|---|
| Gene Length | 876 bp |
|---|
| Protein Length | 291 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 67% |
|---|
| IMG OID | 646391144 |
|---|
| Product | OmpA/MotB domain protein |
|---|
| Protein accession | YP_003270843 |
|---|
| Protein GI | 262199634 |
|---|
| COG category | [N] Cell motility |
|---|
| COG ID | [COG1360] Flagellar motor protein |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 20 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 23 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGATCAAGC ACAAAGCACT GCTGATTGTC GCGGCCGCGC TGCTGGCCGG CTGCGTGAGC
AAGGGAAAAC ACGAGGCTCT GCAGGCCAAG TACAAGGCAC AGACCGAGGT ACTCGAGACC
AAAGAGCTGG AGATCCAGAA CCTGGAGCAG GCCATCGCCG AGGAGGAGGC CAAGCTCAAG
GAGCTGAACA ATCAGCTCGC GGCGTTGAAG GAGAAGGTCC GCCTCACCGA GGAGGAAGTC
GCCTCCATGG AGGCGGAGAA GGTGCGCGTC GAGGGTGAGC TGGCGGCCGT GGTCAAGGAT
CGCGCCCGGC TCAAGTCGTC GGCCGAGGAG CTGTCGCAGG CGCTGAGCGA GCTGGGCAAG
CGCAAGGCCG AGGCCGAGAA GCGCGTGGCC CAGTTCCGCG ATCTGCTCAA CCGCTTCCGC
TCGCTGATCG ACGCCGGCAA GCTCAAGGTC AAGATCACCG ACGGCCGCAT GATCCTCGAG
CTGCCGACCG ACGTGCTGTT CGCCTCGGGC CGCGCCGACC TGTCGGAGGA CGGCATCGTA
TCGATCACCC AGATCGGCGA GGTGCTGGCG GCGATTCCCG ACCGCCGGTA CCAAATCGAG
GGCCACACCG ACAACGTGCC CATCAGCACC GCCCGCTACC CGTCGAACTG GGAGCTAGCC
GCGGCGCGCG CGCTCACGGT GCTCAAGACC CTGCGCGAGG CCGGCATGCA GGGCTCGACC
CTGAGCGCGG CGTCCTTTGG CGAGTTTCGC CCGGTGGCCT CGAACAACAG CGACGCCGGC
CGCCGCGCCA ACCGCCGCAT CGAGATCGTG ATCGTGCCCG ACCTGTCCAG CCTGCCCGGT
TTCGACGAGC TCAACAGCGC GGTCGACGGC CAGTAG
|
|---|
| Protein sequence | MIKHKALLIV AAALLAGCVS KGKHEALQAK YKAQTEVLET KELEIQNLEQ AIAEEEAKLK
ELNNQLAALK EKVRLTEEEV ASMEAEKVRV EGELAAVVKD RARLKSSAEE LSQALSELGK
RKAEAEKRVA QFRDLLNRFR SLIDAGKLKV KITDGRMILE LPTDVLFASG RADLSEDGIV
SITQIGEVLA AIPDRRYQIE GHTDNVPIST ARYPSNWELA AARALTVLKT LREAGMQGST
LSAASFGEFR PVASNNSDAG RRANRRIEIV IVPDLSSLPG FDELNSAVDG Q
|
|---|
| |