Gene Hoch_6475 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagHoch_6475 
Symbol 
ID8548892 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameHaliangium ochraceum DSM 14365 
KingdomBacteria 
Replicon accessionNC_013440 
Strand
Start bp8888204 
End bp8889544 
Gene Length1341 bp 
Protein Length446 aa 
Translation table11 
GC content70% 
IMG OID646391138 
Productaspartate kinase 
Protein accessionYP_003270837 
Protein GI262199628 
COG category[E] Amino acid transport and metabolism 
COG ID[COG0527] Aspartokinases 
TIGRFAM ID[TIGR00657] aspartate kinase 


Plasmid Coverage information

Num covering plasmid clones18 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones20 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGATCGTGA TGAAATTCGG CGGCAGCTCC GTCGCCAACC GCGCCCAGAT CGACAAGGTC 
CTCGACATCG TCCGCGAGCG CCGCGAGCGG CTGCCGATCG TCGTGTCCTC GGCCCACAAG
GGCATCACCA ACGCCCTGGT CGACGCCGCC CGCGCGGCCG CCAAGGGCGA ACTCGATCCC
GAACCCGTGA TCGCGCGCCA GCGCGCCATC GCCGCCTCCC TCGAGTGCAG CGACGAGCTG
CTCGAGCCCT TCTACGGCGA GCTGCGCGCG CTCTTGCGCG GCATCAGCCT GGTGCGCGAG
CTCACCCCGC GCGTGCTCGA CTACGTCTCG AGCTTCGGCG AGCGCATGAG CGTGCGCTGC
CTCGCCGACT TCTTCTCCCG CAGCGGCCTG CCGGCGCGCG CCTACGACAT CTGGGACCTC
GGCTTCATCA CCGACCGCGC CTTCGGCCAG GCTCGCCCCC TGCCCGGCTA CCAGGCCGAT
ATGCGCGCCC GCTTCGAGGA GCTGCCCACC GACGAGATCC CGGTGGTCAC CGGCTTCGTC
GGCAAGAGCA GCGACGGCGA CATCACCACC GTGGGCCGCA ACGGCAGCGA CCTCACCGCC
ACCCTGGTGG CCGCCGCGCT GAGCGTCGAA GAGGTGCAGA TCTGGAGCGA CACCGACGGC
ATCCTCACCG CCGATCCCAG CCTGGTGCCC GACGCCCGCA ACATCCCGCT CATGCACTTC
GACGAGGCCG CCGAGCTGGC GTACTTCGGC GCCCGCATGC TGCACCCCTC GTCGCTGCTG
CCGGCCATGC AGAGCAGCGT GCCGGTGCGC GTGCTCAACA CCAACCGCCC CGACCACCCG
GGCACCGTCA TCGACGACCA CGCCCACACC ACCGAAGGCG CGCTCACCTC CATCGCGTAC
AAGGAGCGCC AGGTGGCCGT GGAGCTGCGC TCGACGCGCA TGTTCGGACA GGCGGGCTTT
CTCGCCCAGG TGTTCGATAT CATGGGACGC CACGGCCTGG TGGTCGACGT GCTGGCCACC
AGCGAGGTCA GCCTGGCGAT GACGCTCACC GACGCCGCCG CCCTCGACCG CGCCATGCCC
GAATTGCGCA CCCTGGGCGA GTGCCGCGTG GTCCCGGGCA AGTCGCTGGT CGTGGTCGTC
GGCCGCAGCC TGGCCGAGCG CCAGGGTCTC GTCGCCGAGA TCCTGCAGGT GGTCGCCGCC
ACCAACGCGC GCGTGGACAT GGTCAGCTAC GCGCTGCGCA GCATCAACTT CTCCATGGTC
ATCGACGACG CCGACGTCGG CCGCGTCATC CCCATGCTGC ACAAAATGCT GCTGGCTCCC
GCGCGCGCCA GCGACGCCTG A
 
Protein sequence
MIVMKFGGSS VANRAQIDKV LDIVRERRER LPIVVSSAHK GITNALVDAA RAAAKGELDP 
EPVIARQRAI AASLECSDEL LEPFYGELRA LLRGISLVRE LTPRVLDYVS SFGERMSVRC
LADFFSRSGL PARAYDIWDL GFITDRAFGQ ARPLPGYQAD MRARFEELPT DEIPVVTGFV
GKSSDGDITT VGRNGSDLTA TLVAAALSVE EVQIWSDTDG ILTADPSLVP DARNIPLMHF
DEAAELAYFG ARMLHPSSLL PAMQSSVPVR VLNTNRPDHP GTVIDDHAHT TEGALTSIAY
KERQVAVELR STRMFGQAGF LAQVFDIMGR HGLVVDVLAT SEVSLAMTLT DAAALDRAMP
ELRTLGECRV VPGKSLVVVV GRSLAERQGL VAEILQVVAA TNARVDMVSY ALRSINFSMV
IDDADVGRVI PMLHKMLLAP ARASDA