Gene Hoch_6471 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagHoch_6471 
Symbol 
ID8548888 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameHaliangium ochraceum DSM 14365 
KingdomBacteria 
Replicon accessionNC_013440 
Strand
Start bp8884905 
End bp8885699 
Gene Length795 bp 
Protein Length264 aa 
Translation table11 
GC content69% 
IMG OID646391134 
ProductEnoyl-CoA hydratase/isomerase 
Protein accessionYP_003270833 
Protein GI262199624 
COG category[I] Lipid transport and metabolism 
COG ID[COG1024] Enoyl-CoA hydratase/carnithine racemase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones19 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones22 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGCAAGCG CGTCGGCGTC CGCTTCTTAC ACGGCCATCG AGTACGACGA TCGAAACGTC 
CCCGTGGCCA AAATCACGTT GAACCGGCCG GATAAGCACA ACGCGATCGG CCCGCTCATG
ATCGGCGAGT TGATGCACGC GCTCGAGGCC GCGCGTCACA ACGAAGCCGC GCGGGTCATC
GTGCTCACCG GCGCGGGCTC CTCGTTCTGC GCGGGCGGCG ACCTCGGCGC CATGAGCCCG
GCGGCCGGCG TGCCCGTGCA GCCGCGCTCG TTCAGCGATC TGTTCCCGGC CATGCACAAC
CTGGGCAAGC CGATCATCGC CATGGTCCGC GGCAACGCCA TGGGCGGCGG CCTGGGCCTG
ATGCTGGGCT GCGACCTGGT CGTGGCCAGC GCCGACGCCA GGTTCGGCCT GCCCGAGGTC
AAGGTCGGCG TGTGGCCGAT GATCGTGATC GGCGAGCTGG TGCGCAACAT CGGCCGCAAG
AACGCGCTCG AGCTGATGCT CACGGGCAAG CGCGTCGGCG CCGAAGAGGC GGCCGCCATG
GGCATGATCA ACCGCGTGGT CGCGCCCGAG CAGCTCGAGG CCGAGACCCA GAAGCTGGCC
GAGACCGTGG CCGAGTTCAG CCCGGCGACC CTGGCCCTGG GCCTGCGCGC CTTCTACAAC
GCCCAGGACA TGGAGTTCGA GGCCGGGCTG GCGTACCTCG AGAAGGAGCT GGGCAAGGTG
CTGGCGCTCG AGGACGCGGC CGAGGGCATC CGCGCGTTCC TGCAGAAGCG CAAGCCCGAG
TGGAAGAGCC GCTGA
 
Protein sequence
MASASASASY TAIEYDDRNV PVAKITLNRP DKHNAIGPLM IGELMHALEA ARHNEAARVI 
VLTGAGSSFC AGGDLGAMSP AAGVPVQPRS FSDLFPAMHN LGKPIIAMVR GNAMGGGLGL
MLGCDLVVAS ADARFGLPEV KVGVWPMIVI GELVRNIGRK NALELMLTGK RVGAEEAAAM
GMINRVVAPE QLEAETQKLA ETVAEFSPAT LALGLRAFYN AQDMEFEAGL AYLEKELGKV
LALEDAAEGI RAFLQKRKPE WKSR