| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Hoch_6456 |
|---|
| Symbol | |
|---|
| ID | 8548871 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Haliangium ochraceum DSM 14365 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_013440 |
|---|
| Strand | - |
|---|
| Start bp | 8864161 |
|---|
| End bp | 8866425 |
|---|
| Gene Length | 2265 bp |
|---|
| Protein Length | 754 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 69% |
|---|
| IMG OID | 646391117 |
|---|
| Product | peptidase S8/S53 subtilisin kexin sedolisin |
|---|
| Protein accession | YP_003270818 |
|---|
| Protein GI | 262199609 |
|---|
| COG category | [O] Posttranslational modification, protein turnover, chaperones |
|---|
| COG ID | [COG1404] Subtilisin-like serine proteases |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 7 |
|---|
| Plasmid unclonability p-value | 0.234127 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 26 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGAGACGAT ATTTTCCCGG CGTGGTGCGC GCCCTGTTCA TATCGATGTT GGCGGCCGTG
GTCGGTTGCG GAGGCGAGAG CGGAACGATC ATCTCGGGCA AGCTCGAGAC GCTTTCGCTC
AGCGGTGCCT CGGAGGCGCC GCCCGTGGGC ACGGCGCTGA GCAACCGCGG CGACGCGGCA
CCCACGGCTG TGGCTGCTGC GGCCGTCGCC GAATTGCACA GCGCCGAAGC GCGCCTGCAG
GCGAGCCGCG ACGTCATGCT GGCGACGCTC GACGACGCCG AGTTCGTGCC CGGTGAGGTC
ATCGTCGCGT TCCGCGAGGA CGGGCTTTTC GGACCGCTAC AGGCGCAGGC CGAGATGCAG
GTGGCGGGTT CGCTGCTGCA GGCGGTGGAG CCGATGGCGG TGGCCAACGC GCACGTGTAT
CGCGCCGCGG ACAGCGACCG CAAACGCACC ATCGAGATGA TCCGCGAGCT CAACCAGCGC
GAGGACGTGC GTTACGCGCA GCCCAATTAC ATCTACCGCG CGCTGCGCAC GCCCAACGAT
CTCGACGCCA AGGGCCAGTG GCACTATCCA GCCATCAACC TGCCCGCGGC CTGGGACCTC
ACGATCGGCT CGTCCGACAC CGTGGTCGCC GTGGTCGACA CCGGCATCCT GTTCGACTCC
CGCAACGCGG GCGCCAACCA CCCCGAGCTG GTCGGCAAGG TGCTGCCCGG CTTCGACTTC
ATCGACGATC TCAACGTCGG CGGCGATGGC GACGAGCGCG ACGACAATCC CTTTGACGTC
GGCGACAATC CCGGCGGACA GTCGAGCTAC CACGGCAGCC ACGTGGCCGG CACCATCGCG
GCCGCGACCA ACAACGGCGT GGGCGTCGCC GGCGTCAACT GGTCGGCCAA CATCCTGCCC
GTGCGCGCGC TCGGCGTCGG CGGCGGCGGC AGCTCGCGCG ACATCCTCCA GGGCGCGCTG
TGGGCGGCCG GGTTCTCCAT CGCCGGGGTG CCCGACAATC GCAACCAGGC CGACGTCATC
AACCTCAGCC TGGGCGGCAA CTCCTTCTGT CCGCCGCTGG ATCAAGAGGT CTACGACGAC
GTCACCGCCC GGGGCACGAT CGTGGTCGTG GCCGCCGGCA ACGAGAACCA GAACGCCGCC
AACGTCACCC CGGCGAGCTG CGCCAACGTC ATCACCGTGG GCGCCACCGA CTTCTCCGGG
CGGCGCGCGC CGTACTCCAA TTTCGGCACC GTGGTCGACG TCATGGCTCC GGGCGGTGAC
CTGGGCCGCG ACGACAACGG CGACGGCGAC GGCGACGGCG TGGTCAGCCT CGGCTTCAAC
GATCTGACCC GGCAGTTCAG CGTGCAGAGC CTGCAGGGCA CATCCATGGC GGCGCCGCAC
GTGGCCGGCG TGGTCTCGCT GATGCGCGCG CTGCGCCCCG ACCTGAACAC CCAGGACGCG
GTCGCCATTC TCCGCGGCAC GGCCAACCAG GTGTCGGCCG TCGACTGCGG GCGCGCCTCC
AGCAGCGAGT GCGGGGCCGG CCTGATCGAC GCCGAGGCCG CCCTGATCAA CGTCGATGGC
GGCCTGCCGC CGCCCAGCAA CGGCCCGCTG GCCTTCAACC CCAACCCCGT GGACTTCGGC
TCGTCGGCAA GCGAGCTGAG CGTGACCATG ACCAACGTGT CCACGCAGCC GCTGAGCTGG
TCGATCAACT CGTTCGAGAC CTCGTCGAGC AACCCGGTCG CGCTGGCGCA GGGCACCTTC
TACTTCGCCG CGGGCGCGAC CACCAGCGGC AGCCTGGATG TCGGACAGTC GGCCCAATTT
ACCCTCGGCG TGGCCCGCGA TTCGGTCTCG GTGCCCGGCA ACTACGCGGC CGAGCTGATC
TTCGAGCTCG GCGGCGAGGA GCAGCGGCTG CTCACGCGCT TCAGCACCTT CCCCGAGGAC
ATCGAAGGCC CCAGCGGCCC CACCGTGGTC GGCGCGTTCA TCGCCGACGC CACGGGCAAC
CCGCAGCTCA TCGCCTCGAA GGAGGAGACG CAGTTCTTCT CGTCGTACAA GCTGTACACC
GAGCCCGGCG AAAACGTGCT CATCGCCTGG TCGGACGACA ACGGCAACTT CGAGATCGAC
GAGGGCGATC ACCTGGGCGT CGAGCCCAGC GTGCTCATCG CCGAGGACCA GCAGATCGGC
GGGGTCAACA TCGAGATGAG CCAGGTGCTG AACACCGCCG CGCTGCCGGC GCCGCTGTCG
CCGGGTGTGC TGCGCGCGCT CGAGGCCATG GCGCCGCGTC CCTGA
|
|---|
| Protein sequence | MRRYFPGVVR ALFISMLAAV VGCGGESGTI ISGKLETLSL SGASEAPPVG TALSNRGDAA
PTAVAAAAVA ELHSAEARLQ ASRDVMLATL DDAEFVPGEV IVAFREDGLF GPLQAQAEMQ
VAGSLLQAVE PMAVANAHVY RAADSDRKRT IEMIRELNQR EDVRYAQPNY IYRALRTPND
LDAKGQWHYP AINLPAAWDL TIGSSDTVVA VVDTGILFDS RNAGANHPEL VGKVLPGFDF
IDDLNVGGDG DERDDNPFDV GDNPGGQSSY HGSHVAGTIA AATNNGVGVA GVNWSANILP
VRALGVGGGG SSRDILQGAL WAAGFSIAGV PDNRNQADVI NLSLGGNSFC PPLDQEVYDD
VTARGTIVVV AAGNENQNAA NVTPASCANV ITVGATDFSG RRAPYSNFGT VVDVMAPGGD
LGRDDNGDGD GDGVVSLGFN DLTRQFSVQS LQGTSMAAPH VAGVVSLMRA LRPDLNTQDA
VAILRGTANQ VSAVDCGRAS SSECGAGLID AEAALINVDG GLPPPSNGPL AFNPNPVDFG
SSASELSVTM TNVSTQPLSW SINSFETSSS NPVALAQGTF YFAAGATTSG SLDVGQSAQF
TLGVARDSVS VPGNYAAELI FELGGEEQRL LTRFSTFPED IEGPSGPTVV GAFIADATGN
PQLIASKEET QFFSSYKLYT EPGENVLIAW SDDNGNFEID EGDHLGVEPS VLIAEDQQIG
GVNIEMSQVL NTAALPAPLS PGVLRALEAM APRP
|
|---|
| |