| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Hoch_6444 |
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| Symbol | |
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| ID | 8548859 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Haliangium ochraceum DSM 14365 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013440 |
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| Strand | + |
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| Start bp | 8844186 |
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| End bp | 8846129 |
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| Gene Length | 1944 bp |
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| Protein Length | 647 aa |
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| Translation table | 11 |
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| GC content | 70% |
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| IMG OID | 646391105 |
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| Product | oligopeptide transporter, OPT family |
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| Protein accession | YP_003270806 |
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| Protein GI | 262199597 |
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| COG category | [S] Function unknown |
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| COG ID | [COG1297] Predicted membrane protein |
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| TIGRFAM ID | [TIGR00728] oligopeptide transporters, OPT superfamily
[TIGR00733] putative oligopeptide transporter, OPT family |
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Plasmid Coverage information |
| Num covering plasmid clones | 16 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 31 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | GTGTCCGCCC CCAAACTACC CCGTTCCGCG TACGAACCCC GCGAAGGTGA GCCCTTCGTC
CCTCTCACCC AGGGCCAGCG CTTGCCCGAG TTCACGTTCA AAGCCGTGAT CTCGGGCATC
ATCCTCGGCG TGATCTTCGG CGCCGCCAAC ACCTACCTCG GCCTCAAAGC CGGGCTCACC
ATCAGCACCT CCATCCCGGT GGCCGTGCTC ACCGTGGTCG CCTTCCGCGC CCTGAGCGCG
TTCGGCGGCA GCCACTCGAT CCTCGAGGCC AACCTGTCGC AGACCGTGGG CTCGGCCAGC
TCCTCGGTGG CCTCGGGCGT GCTGTTCACC ATCCCGGCCC TGTTCATCTG GCAGATGCCG
GTGGCCTGGA GCCAGATCAC GCTGCTCGCC ATGTGCGGCG GCGTCATCGG CATCCTGGCC
ATGATCCCGC TGCGCCGCTA CCTCATCGCC CGCGAGCACG GCACCCTGCC GTACCCGGAG
GGCATGGCCT GCGCCGAGGT GCTGGTCGCC GCCGAGTCGG GGGGCGCGCA GGCGCGGCCG
GTGTTCCTCG GCATCGGCGT GGGCATGCTG TTCAAGCTGC TCACCGACGG CTTCCAGGTG
GTGGCGAGCA AGTTTGAATT GGCGCTGGCC TACAAGGCCA AGCTGTCGAT CAGCGTGTCG
CCCGCCCTGG TCGGCGTCGG CTACATCCTG GGCCTGCGCG TGGCCTCGGT CATGGTCGCC
GGCGGCGCGC TCTCGGCGCT GGTCATCATC CCGGCCATCA ACCTGTGGGG CAGCGGCATG
GACACGCCCT ACTACCCGGA GACCGAGATG CTCATCCGCG ACATGAGCGC CTCGGACATC
TGGAACCGCT ACGTGCGCTA CATCGGCGCC GGCGCGGTGG CCACCGCCGG CATCCTCACC
TTGATCCGCT CGATACCGAC CATGGTCGAG TCGTTCCGGC TGGGCGTGAA GCAGCTCGGC
AGCGGCGCCG AGGAGGCCCG CGACCGCACC GATCTCGACC TGCCGTTCAA GGTCCTGCTG
GCGGTGTTGG CGGTGGTGAT CGCGGTGCTG GCCTTCGTGC CCAACATCCT CGGCTACCTC
GACATCGTCG GCGTGCGCAT CGCGGCCGCG CTGCTCATCG CCGTGTTCGC GTTCTTCTTC
GTCACGGTCA GCGCGCGCAT CGTCGGCCTG GTCGGCGTGA CCTCGAACCC GACCTCGGGC
ATGACCATCG CCACCCTGCT CGGCACCAGC TTGATCTTCT ACGCGCTCGG CTGGACCGAC
ATCTACGGCA AGGCCACCGC GCTCATGGTC GGCACCGCCG TGTGCATCGC GGCCTCGATC
GCGGGCGACT GCTCACAGGA CCTCAAGACC GGCTTCATCC TCGGAGCCAC GCCGCAGCGC
CAGCAGATCG GCGAGCTGAT CGGCGTCATC ACCACCGCGG GCGTGGTCTG CGGCGTCGTC
ATCCTGCTGC ACGACAGCGT CGAGGGCGGA CTCGGCGGCC CGGACCTGCC CGCGCCCCAG
GGCGTGCTGA TGAAGCTGGT CATCGACGGC GTGCTCGACC AGAACCTGCC CTGGACCCTG
ATCTTCATCG GCGCGGCCCT GGCCGGCGTC ACCGCGCTCC TGCGGCTGCC CTCGCTGGCC
TTCGCGGTCG GCCTGTACCT GCCGCTCTAC ACCATGGCGG CCGTGTTCCT CGGCGGCCTG
CTGCGCCATC TGCTCACCCG CAAGCAGCCC GAGGAAGAGG CCGAGCGCCG GCGCGAGCGC
GGCGTGCTGG TGGGCTCGGG CATGGTCGGC GGCGCCGGCC TCACCGGCGT GGTGCTGGCG
CTGTGGGTGG TCGCCAGCGG CGGCCAGCGC ATCCAGGGCG TGGGCCTGAG CCTACCCGGC
TGGGCCGAGC AGCTCGTCGC GCTCGGCACC ATCGTCGCCC TGCTGGGCTG CGTGGCCGCC
ATCGCGCGCC GCCGCTCGAG CTGA
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| Protein sequence | MSAPKLPRSA YEPREGEPFV PLTQGQRLPE FTFKAVISGI ILGVIFGAAN TYLGLKAGLT
ISTSIPVAVL TVVAFRALSA FGGSHSILEA NLSQTVGSAS SSVASGVLFT IPALFIWQMP
VAWSQITLLA MCGGVIGILA MIPLRRYLIA REHGTLPYPE GMACAEVLVA AESGGAQARP
VFLGIGVGML FKLLTDGFQV VASKFELALA YKAKLSISVS PALVGVGYIL GLRVASVMVA
GGALSALVII PAINLWGSGM DTPYYPETEM LIRDMSASDI WNRYVRYIGA GAVATAGILT
LIRSIPTMVE SFRLGVKQLG SGAEEARDRT DLDLPFKVLL AVLAVVIAVL AFVPNILGYL
DIVGVRIAAA LLIAVFAFFF VTVSARIVGL VGVTSNPTSG MTIATLLGTS LIFYALGWTD
IYGKATALMV GTAVCIAASI AGDCSQDLKT GFILGATPQR QQIGELIGVI TTAGVVCGVV
ILLHDSVEGG LGGPDLPAPQ GVLMKLVIDG VLDQNLPWTL IFIGAALAGV TALLRLPSLA
FAVGLYLPLY TMAAVFLGGL LRHLLTRKQP EEEAERRRER GVLVGSGMVG GAGLTGVVLA
LWVVASGGQR IQGVGLSLPG WAEQLVALGT IVALLGCVAA IARRRSS
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