Gene Hoch_6439 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagHoch_6439 
Symbol 
ID8548854 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameHaliangium ochraceum DSM 14365 
KingdomBacteria 
Replicon accessionNC_013440 
Strand
Start bp8835057 
End bp8835518 
Gene Length462 bp 
Protein Length153 aa 
Translation table11 
GC content62% 
IMG OID646391100 
Productheat shock protein Hsp20 
Protein accessionYP_003270801 
Protein GI262199592 
COG category[O] Posttranslational modification, protein turnover, chaperones 
COG ID[COG0071] Molecular chaperone (small heat shock protein) 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.024706 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones31 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGCAAGCA ATATCTCTAC CACCAATCAT CGTGGCAATG ACTATCGCTA CCGCGCCGCG 
GATCCCTTTG CCCTGGCGCG CTCGATCTTC GGATTCGAGC CCTTCTTCGA TGACCGCCGC
GCGAGCAAGA ACGCTTTCGC GCCGTCCTTC GAAGTAAAAG AGCAAGAGGA CGCGTTTGTG
ATTCTGGCCG ACCTGCCCGG CGTGAAAGAG GAGGACCTGG ACGTCTCGCT CAACGGCAAC
GTGCTCACGA TCAGCGGCCA CCGCCAGGCC CAGGAGCGGA AAGAGGGCGA CACCTTCTAC
CTCTACGAGC GCTCCTACGG CACCTTCTCG CGCTCCTTCA CGCTGCCCGA CGAGGCCAAC
GGCGAGGCGA TCGAGGCCAA ACTCAGCGAC GGCGTGCTGG CGCTGAGCAT CGGCAAAAAG
GCCGAGTCCA AGCCGCGCAA GATCTCGCTC AAGCGCTCCT GA
 
Protein sequence
MASNISTTNH RGNDYRYRAA DPFALARSIF GFEPFFDDRR ASKNAFAPSF EVKEQEDAFV 
ILADLPGVKE EDLDVSLNGN VLTISGHRQA QERKEGDTFY LYERSYGTFS RSFTLPDEAN
GEAIEAKLSD GVLALSIGKK AESKPRKISL KRS