Gene Hoch_6427 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagHoch_6427 
Symbol 
ID8548842 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameHaliangium ochraceum DSM 14365 
KingdomBacteria 
Replicon accessionNC_013440 
Strand
Start bp8816293 
End bp8817534 
Gene Length1242 bp 
Protein Length413 aa 
Translation table11 
GC content69% 
IMG OID646391088 
Productmajor facilitator superfamily MFS_1 
Protein accessionYP_003270789 
Protein GI262199580 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones15 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones26 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGTCGATGC AATCGATCAA GCGCCAGTAC CTGTTCGCCT TTGCCGTGAA CGGCGCCGCG 
CTGCCGTACC TGCCGGTGTT CCTCGAGGAG CGCCTGGCCG ATCGTGCCCA GGTCGGCGAT
GTCCTCGGCC TCACCGGCGT GGCCTTCATG ATCACGCCCG TGCTCATGAC CCTGCTGGCC
GACGCGCGGG TGCAGAATCG CAAGATCATC GGCGTGTTGT TCGCGCTCAC CGCGGCGGCC
TCCTTTCTGC TCGCGCTGTC GCACGGCTTC GTCGCCATCG CGCTGGCCTA CGCGCTGTTC
TCGCTGGCCT TCTGGCCGCA GATGTCGCTG CAGGACGGCC TCACCTTCGC CGTGCTGCGC
TCGCGCGAGG CGCTCGGGCT GCCGTTTACG CCCTATCACC GGGTGCGCAT CTACGGCACG
CTGGGCTTCA TTCTGCCGGC GCTGGGTCTG TTTCTGCTCA TGCGCGGCGA CTCCTCGGCC
GCGCTCGCGC TGGTGTTCGG CGGCGCGGTC GCCGTGCTCG GCGTGGGCAA CGCGTTCTCG
CTGCCCTTCG TCGAGCCCGC GGCGCGCAGC GCGACCGGCA AGGGCGCGCG TCTGCCCACG
CTCGGCGCCG CGCGCAAGCT ACTGCGCGGT CCCGGCCTGG TGATGTGTCT GGGCATGTTC
GCGGCCAACC TCGCGGCGGC CGCTTACTAC GGCTTCTATC CCATCTATTT GACCTCGGAG
ATCGGCTTCA GCGAGGAGTG GGTCGGCATC GTCACCATCC TCGGCGTGAT CATCGAGCTC
GGGGTGATGG CCGCGGTCGG CGCGATGGTA CGCGCCTGGG GCATGCGCTG GACCATGGTC
ATCGGGCTGG CCTGCATGGT CGTGCGCATG ATCATCCTGG CCGCGTGGCC GACGCCGTTC
TGGGCCGTGG CCACGCAGAT CTTCCACGGC ATGATGGTCA TCGCCGTGCA CGTGCTGCCG
CCGATGTATC TCGACTCGCT CGCGCACGAC AGCTACCGCA GCTCGATCCA GGGGCTGTAC
ACCATGCTTG TCATCGGCCT CACGCGCATC GTCGGCAGCC TGGTGGGCGG GCGCATCGCC
GAAGCCTCGC TGCTCGACGT CTTCACCGTG AGCGCGGTGG TGACCGCGGC CGCGATGCTG
CTCTTCATCG TTCTGTTTCG CGACCAACCG TCCGAAAACG ACGCGACCGC GGCGCAGTCG
TCGCCACCGC GCCCGCGCCC GCGCCCGCAT CCGCGGGGAT GA
 
Protein sequence
MSMQSIKRQY LFAFAVNGAA LPYLPVFLEE RLADRAQVGD VLGLTGVAFM ITPVLMTLLA 
DARVQNRKII GVLFALTAAA SFLLALSHGF VAIALAYALF SLAFWPQMSL QDGLTFAVLR
SREALGLPFT PYHRVRIYGT LGFILPALGL FLLMRGDSSA ALALVFGGAV AVLGVGNAFS
LPFVEPAARS ATGKGARLPT LGAARKLLRG PGLVMCLGMF AANLAAAAYY GFYPIYLTSE
IGFSEEWVGI VTILGVIIEL GVMAAVGAMV RAWGMRWTMV IGLACMVVRM IILAAWPTPF
WAVATQIFHG MMVIAVHVLP PMYLDSLAHD SYRSSIQGLY TMLVIGLTRI VGSLVGGRIA
EASLLDVFTV SAVVTAAAML LFIVLFRDQP SENDATAAQS SPPRPRPRPH PRG