Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Hoch_6422 |
Symbol | |
ID | 8548837 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Haliangium ochraceum DSM 14365 |
Kingdom | Bacteria |
Replicon accession | NC_013440 |
Strand | - |
Start bp | 8806620 |
End bp | 8808485 |
Gene Length | 1866 bp |
Protein Length | 621 aa |
Translation table | 11 |
GC content | 68% |
IMG OID | 646391083 |
Product | Peptidyl-dipeptidase A |
Protein accession | YP_003270784 |
Protein GI | 262199575 |
COG category | |
COG ID | |
TIGRFAM ID | |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 18 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | 29 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
| |
Sequence |
Gene sequence | ATGCGATCTA GAGACCAGTT GGCGTCGGTA CTTGCGGCGC TCTCCCTCCT CGTTGGCGCG GGCTGTGGCT CGGGCCAGTC CTCCTCGGAA ACCGCGGCCA GCGCAGCGGA AGACGGCGAC GGTGAAGCCG CCCAGAGCGA GCAGCCGAGC GCGGCCGACG CTCAGGCCTT CATCGACGAG TACGAGCGCG AGCGCTACGA CCTGGCGCGC AAGCAGGCCC AGGCGGCCTG GGTGCGCGCC ACGTACATCA CCGACGACAC GGCCGCGCTG GCGGCCGACG TCGACGTCGA GATGATGGCG TTTAGCGCCG CCAAGGCGCA CGAGGCGCAG CGCTTCGCCG ATCTGCCGCT CGACGGCGAG CTGGGGCGCA AGCTGGCGCT CATCCGCCTG AGCGAGACCA CGCCCGGTCC CGACGCGCCC GAGAAACGCG AGGCCCTGGC GCAGGCGCTC AACGAGATGC AGCGCATCTA CGGCACCGGC AAATACTGCC CCAGCGAGGG CACCTGCTGG AACCTCACCG AGCTGTCGCA GCGCCTGGCC AAGAGCCGCA ATCCCAAGGA GCTGCTCGAG GTGTGGACCG GCTGGCGCTC GGTCACGGCC GAGATGCGCG GCGAGTTCGA GCGCTTCGTG GAGCTCGCCA ACGAGGGCGC GCGCGACATG GGCTTCGACG ATCTGGGCGC GCTGTGGCGC TCCAAGTACG ACATGCAGCC CGATGAGACG GCGGCCGAGG TCGATCGCCT GTGGGGCCAG GTGCAGCCGC TCTACGAGCA GCTCCACTGC TACGTGCGCG GCAAGCTGTC ACAGCAATAC GGCGCCAGCG TGGTGCCCGA CGAGGGCGCG ATCCCGGCGC ACGTGCTCGG CAACATGTGG GCCCAGGACT GGAGCTATCT GTCGTGGCTG GTGACCCCGG GCGGCAATCG CGCCCAGGTG TCCGAAATCA CCCGCGCGCT CAAGGCCAAG CGGGTCGACG CCGTGGGCAT GGTGCGCTAC GCCGAGCGCT TCTTCGTGTC GCTGGGCATG CCCGAGCTGC CGCAGAGCTT CTGGGATCGC TCGATGCTGG TGCGCCCGCG CGACCGCGAG GTCGAGTGCC ACGCCAGCGC CTGGAGCCTC GACTGGAAAG AGGATCTGCG CATCAAGATG TGCATCGAGA TCAACGACGA GGACTTCTCG ACCATCCACC ACGAGCTCGG CCACATCTAT TACGACTGGG CGTACAAAGA CCAGCCGATT CTGTTCGCCG ACAGCGCGCA CGACGGCTTC CACGAGGCGC TCGGCGACAC CATCGCGCTG TCGGTGACGC CCTCGTACCT CAAGGAGATC GGCCTGGTGC CGCGTTCGAG CCAGAACGAC ACCGCCCAGC TCCTCGACCG CGCGCTGCAG AAGGTCGCCT TTCTGCCCTT CGGCCTGCTG GTGGACAAGT GGCGCTGGCA GGTGTTCTCG GGCGAAGTCG GCCCCGAGAA CTACAACGAG GCCTGGTGGA AGCTGCGCGA GCAGTACCAG GGCGTGCGTC CGCCGAGCGA GCGCAGCGAG AGCGATTTCG ACCCCGGCGC CAAGTACCAC GTGGCCTCGA ACGTGCCCTA TCTGCGCTAC TTCCTGGCCC ACGTGCTGCA GTTCCAGCTC CACCGCTCGC TGTGCGAGGC CGCCGGTCAC GAGGGGCCGC TGCACCAGTG CTCGATCTAC GGCAGCAAAG AGGCCGGCGC GAAGCTGCAG GCGATGATGG AGCTGGGCGC GTCGAAGCCC TGGCCCGAGG CGCTGGCCCT GATCACGGGC GACGACCAGA TGGATGCCTC GGCCATGATC GAATACTTCG CTCCGCTGAT GACCTGGCTC GAGCAGCAGA ACCAGGGCCG CACCTGCGGC TACTGA
|
Protein sequence | MRSRDQLASV LAALSLLVGA GCGSGQSSSE TAASAAEDGD GEAAQSEQPS AADAQAFIDE YERERYDLAR KQAQAAWVRA TYITDDTAAL AADVDVEMMA FSAAKAHEAQ RFADLPLDGE LGRKLALIRL SETTPGPDAP EKREALAQAL NEMQRIYGTG KYCPSEGTCW NLTELSQRLA KSRNPKELLE VWTGWRSVTA EMRGEFERFV ELANEGARDM GFDDLGALWR SKYDMQPDET AAEVDRLWGQ VQPLYEQLHC YVRGKLSQQY GASVVPDEGA IPAHVLGNMW AQDWSYLSWL VTPGGNRAQV SEITRALKAK RVDAVGMVRY AERFFVSLGM PELPQSFWDR SMLVRPRDRE VECHASAWSL DWKEDLRIKM CIEINDEDFS TIHHELGHIY YDWAYKDQPI LFADSAHDGF HEALGDTIAL SVTPSYLKEI GLVPRSSQND TAQLLDRALQ KVAFLPFGLL VDKWRWQVFS GEVGPENYNE AWWKLREQYQ GVRPPSERSE SDFDPGAKYH VASNVPYLRY FLAHVLQFQL HRSLCEAAGH EGPLHQCSIY GSKEAGAKLQ AMMELGASKP WPEALALITG DDQMDASAMI EYFAPLMTWL EQQNQGRTCG Y
|
| |