Gene Hoch_6422 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagHoch_6422 
Symbol 
ID8548837 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameHaliangium ochraceum DSM 14365 
KingdomBacteria 
Replicon accessionNC_013440 
Strand
Start bp8806620 
End bp8808485 
Gene Length1866 bp 
Protein Length621 aa 
Translation table11 
GC content68% 
IMG OID646391083 
ProductPeptidyl-dipeptidase A 
Protein accessionYP_003270784 
Protein GI262199575 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones18 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones29 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCGATCTA GAGACCAGTT GGCGTCGGTA CTTGCGGCGC TCTCCCTCCT CGTTGGCGCG 
GGCTGTGGCT CGGGCCAGTC CTCCTCGGAA ACCGCGGCCA GCGCAGCGGA AGACGGCGAC
GGTGAAGCCG CCCAGAGCGA GCAGCCGAGC GCGGCCGACG CTCAGGCCTT CATCGACGAG
TACGAGCGCG AGCGCTACGA CCTGGCGCGC AAGCAGGCCC AGGCGGCCTG GGTGCGCGCC
ACGTACATCA CCGACGACAC GGCCGCGCTG GCGGCCGACG TCGACGTCGA GATGATGGCG
TTTAGCGCCG CCAAGGCGCA CGAGGCGCAG CGCTTCGCCG ATCTGCCGCT CGACGGCGAG
CTGGGGCGCA AGCTGGCGCT CATCCGCCTG AGCGAGACCA CGCCCGGTCC CGACGCGCCC
GAGAAACGCG AGGCCCTGGC GCAGGCGCTC AACGAGATGC AGCGCATCTA CGGCACCGGC
AAATACTGCC CCAGCGAGGG CACCTGCTGG AACCTCACCG AGCTGTCGCA GCGCCTGGCC
AAGAGCCGCA ATCCCAAGGA GCTGCTCGAG GTGTGGACCG GCTGGCGCTC GGTCACGGCC
GAGATGCGCG GCGAGTTCGA GCGCTTCGTG GAGCTCGCCA ACGAGGGCGC GCGCGACATG
GGCTTCGACG ATCTGGGCGC GCTGTGGCGC TCCAAGTACG ACATGCAGCC CGATGAGACG
GCGGCCGAGG TCGATCGCCT GTGGGGCCAG GTGCAGCCGC TCTACGAGCA GCTCCACTGC
TACGTGCGCG GCAAGCTGTC ACAGCAATAC GGCGCCAGCG TGGTGCCCGA CGAGGGCGCG
ATCCCGGCGC ACGTGCTCGG CAACATGTGG GCCCAGGACT GGAGCTATCT GTCGTGGCTG
GTGACCCCGG GCGGCAATCG CGCCCAGGTG TCCGAAATCA CCCGCGCGCT CAAGGCCAAG
CGGGTCGACG CCGTGGGCAT GGTGCGCTAC GCCGAGCGCT TCTTCGTGTC GCTGGGCATG
CCCGAGCTGC CGCAGAGCTT CTGGGATCGC TCGATGCTGG TGCGCCCGCG CGACCGCGAG
GTCGAGTGCC ACGCCAGCGC CTGGAGCCTC GACTGGAAAG AGGATCTGCG CATCAAGATG
TGCATCGAGA TCAACGACGA GGACTTCTCG ACCATCCACC ACGAGCTCGG CCACATCTAT
TACGACTGGG CGTACAAAGA CCAGCCGATT CTGTTCGCCG ACAGCGCGCA CGACGGCTTC
CACGAGGCGC TCGGCGACAC CATCGCGCTG TCGGTGACGC CCTCGTACCT CAAGGAGATC
GGCCTGGTGC CGCGTTCGAG CCAGAACGAC ACCGCCCAGC TCCTCGACCG CGCGCTGCAG
AAGGTCGCCT TTCTGCCCTT CGGCCTGCTG GTGGACAAGT GGCGCTGGCA GGTGTTCTCG
GGCGAAGTCG GCCCCGAGAA CTACAACGAG GCCTGGTGGA AGCTGCGCGA GCAGTACCAG
GGCGTGCGTC CGCCGAGCGA GCGCAGCGAG AGCGATTTCG ACCCCGGCGC CAAGTACCAC
GTGGCCTCGA ACGTGCCCTA TCTGCGCTAC TTCCTGGCCC ACGTGCTGCA GTTCCAGCTC
CACCGCTCGC TGTGCGAGGC CGCCGGTCAC GAGGGGCCGC TGCACCAGTG CTCGATCTAC
GGCAGCAAAG AGGCCGGCGC GAAGCTGCAG GCGATGATGG AGCTGGGCGC GTCGAAGCCC
TGGCCCGAGG CGCTGGCCCT GATCACGGGC GACGACCAGA TGGATGCCTC GGCCATGATC
GAATACTTCG CTCCGCTGAT GACCTGGCTC GAGCAGCAGA ACCAGGGCCG CACCTGCGGC
TACTGA
 
Protein sequence
MRSRDQLASV LAALSLLVGA GCGSGQSSSE TAASAAEDGD GEAAQSEQPS AADAQAFIDE 
YERERYDLAR KQAQAAWVRA TYITDDTAAL AADVDVEMMA FSAAKAHEAQ RFADLPLDGE
LGRKLALIRL SETTPGPDAP EKREALAQAL NEMQRIYGTG KYCPSEGTCW NLTELSQRLA
KSRNPKELLE VWTGWRSVTA EMRGEFERFV ELANEGARDM GFDDLGALWR SKYDMQPDET
AAEVDRLWGQ VQPLYEQLHC YVRGKLSQQY GASVVPDEGA IPAHVLGNMW AQDWSYLSWL
VTPGGNRAQV SEITRALKAK RVDAVGMVRY AERFFVSLGM PELPQSFWDR SMLVRPRDRE
VECHASAWSL DWKEDLRIKM CIEINDEDFS TIHHELGHIY YDWAYKDQPI LFADSAHDGF
HEALGDTIAL SVTPSYLKEI GLVPRSSQND TAQLLDRALQ KVAFLPFGLL VDKWRWQVFS
GEVGPENYNE AWWKLREQYQ GVRPPSERSE SDFDPGAKYH VASNVPYLRY FLAHVLQFQL
HRSLCEAAGH EGPLHQCSIY GSKEAGAKLQ AMMELGASKP WPEALALITG DDQMDASAMI
EYFAPLMTWL EQQNQGRTCG Y