Gene Hoch_6420 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagHoch_6420 
Symbol 
ID8548835 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameHaliangium ochraceum DSM 14365 
KingdomBacteria 
Replicon accessionNC_013440 
Strand
Start bp8803276 
End bp8804811 
Gene Length1536 bp 
Protein Length511 aa 
Translation table11 
GC content71% 
IMG OID646391081 
Productserine/threonine protein kinase 
Protein accessionYP_003270782 
Protein GI262199573 
COG category[K] Transcription
[L] Replication, recombination and repair
[R] General function prediction only
[T] Signal transduction mechanisms 
COG ID[COG0515] Serine/threonine protein kinase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones18 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones29 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
TTGCATTCTT CGCAGGGCCC GAGACAAGAT GACGCAGTGG AGACGCACGC CCTCAGCTCC 
CGGTTCATCG CCGGGAAGTA CGAGCTCCAA GAGGTGCTCG GGGAGGGCGG TATGGGCGTG
GTCGTGGCCG CGCTGCACAC GCAGCTCGAG CAGCGCGTCG CCATCAAGCT GATGCGGCGC
GAGATGGCCG ACGATCAGGC CGCCATTCAG CGCTTCATGC GCGAGGCGCG CGCGGCCGCC
GCGCTGCGCA GCGAGAACGT GGCTCGCGTC GGCGACGTCG GCATCCGCGA GGACGGCACG
CCGTACCTGG TGATGGAGTA TCTCGAGGGC GCGGACCTCG GCACCCTGCT CAAACGCGAG
GGGCCGCTGC CCGTGATCGT GGCCGTGGAT TACGTGCTGC AGGCGTGCTC AGCCATCAGC
GAGGCCCACG CGCAGGGCAT CGTGCACCGC GACCTCAAGC CCTCGAACCT GTTTCTCACC
CGCCGCCCCG ACGGCCGACC CCTGGTCAAA GTCCTGGATT TCGGCGTCTC CAAGATCCTG
CCCGAGGCCG GAATCGCCGC CGAGGGGCTC ACCCAGACCG CCACCGCCGT GATCATGGGC
TCGCCGGCCT ATATCTCGCC CGAGCAGGCC AAATCCAGCC GCGATGTCGA CGCCCGCAGC
GATATCTGGT CGCTCGGCGT GGTCCTCTAT CAGCTCATGA GCGGGCGGCT GCCCTTTGCC
TCGGAGTCGA TCGTCCAGCT CTTCGGCAAG CTGTGCTACG AGCCGCCCGC GCCGCTGCGC
GAACACACGC CCTCGGTGCC GCCCGCGCTC GAGCAGGTGC TGCTGCGCTG CATGGACAAG
GATCTCGCCT GCCGCTACCA GAGCGTGGCC GACCTGGCTC GCGATCTGCG GCCGTTCAGC
TCGGATGCGC CCACTGCGTC GAGCTCGGGC GGCTTGCACG CGGTCAGTCT GCCGACGCCG
GCGGCGCCGA TGCCGTCGGC CGCGGCCCCC TCGGCCCAGA TGCCGGCGCG GTCCTCGCAA
CTCGTCGCGC GGCCGCAGCC GAGCTCGCAC AAGCGCGTGT TCCTCGGCTT GATCGCCGGC
GTCATCGCCA TCATGGCGCT GTTCTATGTC TTCGGTCGCG ATGACGGCGC CGCGCCCGCC
GCCGACGCGG TCGCGGGCGA GGACACCGCC GCCGAGGCCG CGGCGCGTGC AGACGATGAC
ACCGAGGCCG CCGCCAGCGC GGCCGCGAGC GGCGATGACG AGACCGCCGA CGACGGCGCC
GTCGCGGCTG GTGCCGGAGG TGACGCCGAC GGCGACGCCA AAAACGACGC CAACGCGGAC
GCCGCGCAGC CGTCTGCCGC CGAGGAAGAC GACGGCGCCG AGCGCGCCGC CGACGGCGAC
ACCACCCGGG CCGCGGCGAC GAGGCGCGCG AACAAGCGGC GTACGCGCAG ACCGGTGCGG
CGCACGCGCA AGCCGAGCAG AGATACGGCC GAAGACACCC GCAAAGACAC CGGCAAGAAG
CCAAAGGACG AAGATCCGTT TGGCTCCATC TTCTGA
 
Protein sequence
MHSSQGPRQD DAVETHALSS RFIAGKYELQ EVLGEGGMGV VVAALHTQLE QRVAIKLMRR 
EMADDQAAIQ RFMREARAAA ALRSENVARV GDVGIREDGT PYLVMEYLEG ADLGTLLKRE
GPLPVIVAVD YVLQACSAIS EAHAQGIVHR DLKPSNLFLT RRPDGRPLVK VLDFGVSKIL
PEAGIAAEGL TQTATAVIMG SPAYISPEQA KSSRDVDARS DIWSLGVVLY QLMSGRLPFA
SESIVQLFGK LCYEPPAPLR EHTPSVPPAL EQVLLRCMDK DLACRYQSVA DLARDLRPFS
SDAPTASSSG GLHAVSLPTP AAPMPSAAAP SAQMPARSSQ LVARPQPSSH KRVFLGLIAG
VIAIMALFYV FGRDDGAAPA ADAVAGEDTA AEAAARADDD TEAAASAAAS GDDETADDGA
VAAGAGGDAD GDAKNDANAD AAQPSAAEED DGAERAADGD TTRAAATRRA NKRRTRRPVR
RTRKPSRDTA EDTRKDTGKK PKDEDPFGSI F