Gene Hoch_5932 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagHoch_5932 
Symbol 
ID8548346 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameHaliangium ochraceum DSM 14365 
KingdomBacteria 
Replicon accessionNC_013440 
Strand
Start bp8126180 
End bp8127214 
Gene Length1035 bp 
Protein Length344 aa 
Translation table11 
GC content66% 
IMG OID646390598 
Productcell shape determining protein, MreB/Mrl family 
Protein accessionYP_003270300 
Protein GI262199091 
COG category[D] Cell cycle control, cell division, chromosome partitioning 
COG ID[COG1077] Actin-like ATPase involved in cell morphogenesis 
TIGRFAM ID[TIGR00904] cell shape determining protein, MreB/Mrl family 


Plasmid Coverage information

Num covering plasmid clones10 
Plasmid unclonability p-value0.126603 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones22 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGATTTTCG ATTGGGTCTA CGGAATGTTT TCCAATGACC TCGCCATCGA TCTCGGGACG 
GCGACGACGC TCACCTTCGT CAAGGGCAAG GGCATCGTCG CCAACGAGCC ATCGGTGGTG
GCCGTCCAGG GCGGGCAGAG CGGGGTCAAG CGCGTCTTGG CCGTGGGCAA GGAGGCCAAG
GAGATGCTCG GGCGCACCCC GGGCAACATC GTCGCCATCC GCCCCATGAA AGACGGCGTC
ATCGCCGACT TCGAAGTCAC CGAGGCCATG CTGCGCTACT TCATTCAGAA GGCGCACCAT
CGCCGCACGC TGGTTCGGCC GCGCGTCATC GTCTGCGTTC CCTCGGGCAT CACCGAGGTC
GAGAAGCGCG CGGTGCGCGA CAGCGCCCTG GCCGCGAGCG CGCGCGAGGT CTATTTGATC
GAGGAGCCGA TGGCGGCCGC GATCGGCGGC GGGCTGCCGA TCACCGAGCC CTCGGGCAAC
ATGATCGTCG ATATCGGCGG CGGCACCACC GAGGTGGCCG TGATCTCGCT GGCCGGTATC
GTCATCTCGA AGTCGATCCG GGTGGCCGGC GACAAGATGG ACGAGGCCAT CGTCCAGTAC
ATCAAGCGCA AGTACAACCT GCTCATCGGT GAGCGCACCG CCGAGATCAT CAAGAAGGAG
ATCGGCTCTG CCTTCCCGCT CGAGGAGCCG CTCACGGTCG AGGTCAAGGG CCGCGACCTG
GTGGCCGGCG TGCCCAAGAC CCTGCTGGTC AACTCGGACG AGATCCGCGA GGCCCTGCAG
GAGCCGGTCA ACGCCATCGT CGACGCGGTG CGCACGGTGC TCGAGCGGAC GCCGCCCGAG
CTCAGCGCCG ACATCGTCGA TAAAGGGATC GTACTCTCGG GCGGCGGCGC GCTGCTCAAG
AACCTCGATG TGCTGTTGCG CGAGGAGACC GGCCTGCCGG TGATGGTCTG CGAGAATCCG
CAGCTCGCCG TGGTTCTGGG TACGGGTCGG GCGCTCGATG AGCTGCCGCT CCTCAAGGAG
ATCGCGCTGC AGTAG
 
Protein sequence
MIFDWVYGMF SNDLAIDLGT ATTLTFVKGK GIVANEPSVV AVQGGQSGVK RVLAVGKEAK 
EMLGRTPGNI VAIRPMKDGV IADFEVTEAM LRYFIQKAHH RRTLVRPRVI VCVPSGITEV
EKRAVRDSAL AASAREVYLI EEPMAAAIGG GLPITEPSGN MIVDIGGGTT EVAVISLAGI
VISKSIRVAG DKMDEAIVQY IKRKYNLLIG ERTAEIIKKE IGSAFPLEEP LTVEVKGRDL
VAGVPKTLLV NSDEIREALQ EPVNAIVDAV RTVLERTPPE LSADIVDKGI VLSGGGALLK
NLDVLLREET GLPVMVCENP QLAVVLGTGR ALDELPLLKE IALQ