| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Hoch_5880 |
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| Symbol | |
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| ID | 8548294 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Haliangium ochraceum DSM 14365 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013440 |
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| Strand | - |
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| Start bp | 8061143 |
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| End bp | 8063071 |
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| Gene Length | 1929 bp |
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| Protein Length | 642 aa |
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| Translation table | 11 |
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| GC content | 66% |
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| IMG OID | 646390546 |
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| Product | succinate dehydrogenase or fumarate reductase, flavoprotein subunit |
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| Protein accession | YP_003270248 |
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| Protein GI | 262199039 |
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| COG category | [C] Energy production and conversion |
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| COG ID | [COG1053] Succinate dehydrogenase/fumarate reductase, flavoprotein subunit |
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| TIGRFAM ID | [TIGR01811] succinate dehydrogenase or fumarate reductase, flavoprotein subunit, Bacillus subtilis subgroup |
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Plasmid Coverage information |
| Num covering plasmid clones | 7 |
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| Plasmid unclonability p-value | 0.0917761 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 21 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAAGTTGG ATGCGAGAAT TCCCAGCGGT CCCATCGAGG ACAAATGGGA CAAGTGCAAG
TTCGACATGA AGTTGGTCAA CCCGGCCAAC AAGCGCAAGT TCGACATCAT CATCGTCGGT
TCGGGCCTCG CCGGTGGCGC CGCCGCGGCC ACCCTGGCCG AGCTCGGCTA CAACGTCGCC
TGCTTCTGCT ACCAGGACAG CCCGCGCCGC GCGCACAGCA TCGCGGCCCA GGGCGGCATC
AACGCGGCCA AGAACTACCA GAACGACGGC GATAGCGTCT TCCGGCTGTT CTACGACACG
GTCAAGGGCG GCGACTTCCG CTCGCGCGAG GCCAACGTCT ATCGCCTCGC CCAGGTGAGC
GCGAACATTA TCGACCAGGC GGTCGCCCAA GGCGTGCCCT TCGCCCGCGA GTACGGCGGC
ACCCTGGCCA ACCGCTCCTT CGGCGGTGCC CAGGTCTCGC GTACCTTCTA CGCCGCCGGC
CAGACCGGCC AGCAGCTCCT GCTCGGCGTG TACTCGGCCC TGAGCCGGCA GATCGCGGCC
GGCAAGGTCA AGATGTTCAC GCGCACCGAG ATGCTCGAGC TGGTCGTGGT CGACGGCCGC
GCCGCCGGCA TCGTCACCCG CAACATGGTG ACCGGCAAGA TCGAGTCGCA CGCCGGCCAC
GCCGTGGTGC TGGCCTCGGG CGGCTACGGC AACGTCTTCT ACCTGTCGAC CAACGCGATG
GGTTGCAACG TCACCGCCGC CTACCGCGCG TACAAAAAGG GCGCTGGCTT CGCCAACCCC
TGCTACACGC AGATTCACCC CACCTGCATC CCGGTGAGCG GCAGCTACCA GTCGAAGCTC
ACGCTGATGA GTGAGTCGCT GCGCAACGAC GGCCGCGTGT GGGTGCCCAA GAACAAGGAA
GACCTGGGCA AGCCGCCGCA CGAGATCCCC GAGAATCGCC GCGACTACTA CCTCGAGCGC
AAGTACCCGA GCTTCGGCAA CCTGTCGCCG CGCGACATCG CCTCGCGCAG CGCCAAGGAG
GTCTGCGACG AGGGCCGCGG TGTCGGTCCC ACCGTCGATG GCGTCAGCCG CGGCGTGTAC
CTCGACTTCC GCGACGCCAT CCAGCGCCTC GGCGAGGACG CGATTCGCCA GCGCTACGGC
AACCTGTTCC ACATGTACCA GAAGATCACC AACGAGAACC CGTACAAGGT TCCGATGCGG
ATCTATCCGG CCGTCCACTA CACCATGGGC GGTCTGTGGG TGGACTATCA CCTGCAGAGC
ACCATCCCGG GCCTGTTCGT GCTCGGCGAG GCCAACTTCT CCGACCACGG CGCCAACCGC
CTGGGCGCCA GCGCGCTCAT GCAGGGCCTG GCCGACGGCT ACTTCGTCAT CCCCTACACC
CTGGGCCACT ACCTGGGCGC CGAGAAGCCG CAGCGGGTCT CGGCCGACCA CCCCGAGTTC
CTGCGCGCCG AAGAGGGCGT CAAGGGCCGC GTCAACCGCT TGCTCGGCAT CAACGGCAAG
CGCTCGGTGG ACTCCTTCCA CCGCGAGCTC GGCAACATCA TGTGGGACTA CTGCGGCATG
GCGCGCAACC GCCAGGGCCT CGAGCAGGCG ATCGAGAAGA TCCCGACCCT GCGCGCCGAG
TTCTGGGAAA ATGTCCGCGT GCTCGGCGAG AACGAGACCT TCAACCAGTC GCTCGAGAAA
GCCGGACGCG TGGCCGATTT CCTCGAGTTC GCCGAGGTGA TGTGTCGCGA CGCGCTCACC
CGCGAGGAGA GCGCGGGTGG CCACTTCCGC GAGGAACACC AGACCGAGGA CGGCGAGGCC
AAGCGCGACG ACGAGAACTT CGCCCACGCC GCGGTCTGGG AGTATCAGGG CGACGATCAG
CAGCCGACGC GCCACGTCGA GCCGATGGTC TTCGAGAACG TGAAGCTCGC CACCAGGAGT
TACAAATAA
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| Protein sequence | MKLDARIPSG PIEDKWDKCK FDMKLVNPAN KRKFDIIIVG SGLAGGAAAA TLAELGYNVA
CFCYQDSPRR AHSIAAQGGI NAAKNYQNDG DSVFRLFYDT VKGGDFRSRE ANVYRLAQVS
ANIIDQAVAQ GVPFAREYGG TLANRSFGGA QVSRTFYAAG QTGQQLLLGV YSALSRQIAA
GKVKMFTRTE MLELVVVDGR AAGIVTRNMV TGKIESHAGH AVVLASGGYG NVFYLSTNAM
GCNVTAAYRA YKKGAGFANP CYTQIHPTCI PVSGSYQSKL TLMSESLRND GRVWVPKNKE
DLGKPPHEIP ENRRDYYLER KYPSFGNLSP RDIASRSAKE VCDEGRGVGP TVDGVSRGVY
LDFRDAIQRL GEDAIRQRYG NLFHMYQKIT NENPYKVPMR IYPAVHYTMG GLWVDYHLQS
TIPGLFVLGE ANFSDHGANR LGASALMQGL ADGYFVIPYT LGHYLGAEKP QRVSADHPEF
LRAEEGVKGR VNRLLGINGK RSVDSFHREL GNIMWDYCGM ARNRQGLEQA IEKIPTLRAE
FWENVRVLGE NETFNQSLEK AGRVADFLEF AEVMCRDALT REESAGGHFR EEHQTEDGEA
KRDDENFAHA AVWEYQGDDQ QPTRHVEPMV FENVKLATRS YK
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