Gene Hoch_5815 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagHoch_5815 
Symbol 
ID8548229 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameHaliangium ochraceum DSM 14365 
KingdomBacteria 
Replicon accessionNC_013440 
Strand
Start bp7987624 
End bp7987923 
Gene Length300 bp 
Protein Length99 aa 
Translation table11 
GC content71% 
IMG OID646390482 
Productmicrocompartments protein 
Protein accessionYP_003270184 
Protein GI262198975 
COG category[C] Energy production and conversion
[Q] Secondary metabolites biosynthesis, transport and catabolism 
COG ID[COG4577] Carbon dioxide concentrating mechanism/carboxysome shell protein 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones14 
Plasmid unclonability p-value0.588526 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones19 
Fosmid unclonability p-value0.838674 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGCTGACG CCCTGGGAAT GATCGAAGTC AGAGGCTTCG TCGGCATGGT CGAGGCCGCC 
GACGCCATGG TCAAGGCCGC CAAAGTCGAA CTGATCGGCT ACGAGAAGAC CGGCGGCGGC
TACGTCACCG CCGTGGTCCG CGGCGATGTC GCCGCGGTCA AGGCCGCCAC CGAGGCCGGC
CAGCGCGCGG CCGAGCGCGT CGGCGAAGTC GTCGCCGTGC ACGTCATCCC GCGCCCGCAC
GTCAACGTCG ACGCGGCGCT GCCCCTGGGC CGCACCCCGG GGATGGACAA GAGCGCGTAG
 
Protein sequence
MADALGMIEV RGFVGMVEAA DAMVKAAKVE LIGYEKTGGG YVTAVVRGDV AAVKAATEAG 
QRAAERVGEV VAVHVIPRPH VNVDAALPLG RTPGMDKSA